Gene SeD_A1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1251 
Symbol 
ID6875663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1245209 
End bp1246129 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content56% 
IMG OID642784423 
Producthypothetical protein 
Protein accessionYP_002215096 
Protein GI198245152 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID[TIGR00950] Carboxylate/Amino Acid/Amine Transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.948426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCC GGCAGTTATT ACCTCTTTTT GGCGCGCTTT TTGCCTTGTA CATCATTTGG 
GGGTCTACCT ATTTTGTTAT CCGCATAGGC GTTGAAAGCT GGCCGCCGCT GATGATGGCA
GGCGTACGTT TTCTCTCGGC GGGGATGTTG CTCATGGCGT TTTTGCTGTT GCGCGGCGAA
AAACTTCCGC CGCTGCGCCA GACCATCAAC GCCGCGCTGA TTGGTCTACT GCTGCTGGCG
GTGGGTAACG GCCTGGTGAC GGTGGCGGAG CATCAAAACG TGCCATCGGG CATTGCTGCC
GTCGTGGTCG CCACTGTCCC GCTATTTACG CTGTGCTTTA GCTACTTTTT TGGTATTAAA
ACGCGCAAAT TAGAATGGGT GGGGATTGCC ATTGGACTTG CCGGGATTAT TCTGCTGAAC
AGCGGCGGCA ACTTAAGCGG CAATCCGTGG AGCGCGATTT TGATCCTGAT AGGTTCGATG
AGCTGGGCAT TTGGTTCCGT TTACGGCTCG CGCATCGCCC TCCCTGTGGG CATGATGGCG
GGCGCGATTG AAATGCTGGC GGCGGGCGTG GTATTGCTTT GCGCGGCGTT TCTTTCCGGC
GAAAAGCTCG CCACGCTGCC TGGTTTATCG GGGTTTATGG CCGTCGGCTA CCTGGCGTTG
TTCGGTTCTA TTATCGCCAT TAATGCCTAT ATGTACCTGA TTCGCAACGT CAGTCCGGCA
CTGGCGACCA GCTACGCCTA TGTGAATCCG GTTGTCGCCG TGTTGCTTGG CACTGGCCTG
GGCGGTGAGA GGTTATCGCC CATTGAATGG GCCGCGCTGG GTGTGATTGT GTTTGCCGTA
GTGCTGGTGA CTCTGGGTAA GTACCTGTTT CCTGTCAAGG CGGTGGTCAC GCCGTGTAAA
ACGGAAGATT CACGCCAGTA G
 
Protein sequence
MRFRQLLPLF GALFALYIIW GSTYFVIRIG VESWPPLMMA GVRFLSAGML LMAFLLLRGE 
KLPPLRQTIN AALIGLLLLA VGNGLVTVAE HQNVPSGIAA VVVATVPLFT LCFSYFFGIK
TRKLEWVGIA IGLAGIILLN SGGNLSGNPW SAILILIGSM SWAFGSVYGS RIALPVGMMA
GAIEMLAAGV VLLCAAFLSG EKLATLPGLS GFMAVGYLAL FGSIIAINAY MYLIRNVSPA
LATSYAYVNP VVAVLLGTGL GGERLSPIEW AALGVIVFAV VLVTLGKYLF PVKAVVTPCK
TEDSRQ