| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1228 |
|---|
| Symbol | |
|---|
| ID | 6872445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1223324 |
|---|
| End bp | 1223740 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642784407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002215080 |
|---|
| Protein GI | 198243684 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.225537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACCGG CGCGCGAAAA GCCTGCCGGA TCGCTGTTTG AGCGTCTGGA AAACCCTCCT
GCCAGAAACT GGCGGGAGGG CAGTAATATA GAGGCGTTCA GGCAGTCCAT TCGCCATAGT
CTGCGCAATA TCCTGAACAC CCGCTCCGGC AGTTGTCGGG GAACACCGGG GCTGGGTATT
GAAGAGCCGG AAGGGTCGGA TAATTACCGC AGCGCCATGA GCCAGGCCAT CGTGCAGTGT
ATTGAGCGTT ATGAACCCCG GATTTCGCAC GCGGAGGTCC GGGCAATCCT GCCACAGGCC
GCCAGCCCAC AGGAGATAAT TTTTCGTATC ACCGCCTGGG TGACATTTAA CGATATCGAC
GATGTGCTGG AGTTTGATAT GGCACCGGAC GGTAGTCAGC ATTATCGGGT GGAGTAG
|
|---|
| Protein sequence | MIPAREKPAG SLFERLENPP ARNWREGSNI EAFRQSIRHS LRNILNTRSG SCRGTPGLGI
EEPEGSDNYR SAMSQAIVQC IERYEPRISH AEVRAILPQA ASPQEIIFRI TAWVTFNDID
DVLEFDMAPD GSQHYRVE
|
|---|
| |