| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1226 |
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| Symbol | |
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| ID | 6872453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1220414 |
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| End bp | 1221502 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642784405 |
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| Product | hypothetical protein |
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| Protein accession | YP_002215078 |
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| Protein GI | 198243822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.425687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGAA AGAACCGGGC AACACCCGCT CATCTGAGTC CGGACGATGC TCCGGCGCAG
GATGAACAAC GCACGCTGCG GGAGCCGTTG TTTCAGGACG CCTGCGCCTG CAATTTTTTC
GCGCTCTCTG AGCTGCTGCA CCGGCTGGCA TCAGAAGGCG GCGAAACGCC AGTGTTATCC
CTGGATACCC CTCCGGCGCA GGAAACCATT CGTTTCCAGG CGGACGCCAG CCTGGGATTT
CCGGTAAGCG ATGTCAGCGC GCTGGAGCAG GATGCTTCCG GGTTGTTCCG GATGACCACC
ACCTTTATGG GATTGCAGGG CAGCCAGTCG CCCCTCCCCG GCTATTACCT TGATCACCTG
GCCTGGAAAT CCGCGCACGA GCAGAGTCCG GTCAGCGATT TTCTGGATAT GTTCAGCCAT
CGCCTGACGC AGTTTGTCTG GCATATCTGG CGTAAGTACC GTTACCACGT CGCTTTCCGT
AACGGCGGCG TGGATGCGTT CTCGCAGCGG ATGTACTCCC TGGTGGGGCT GGGCCACCGG
CAGCTTCGCG ACAGTCTGCC CGTTAACCAC AGCAAAATGC TGGCCTATGC CGGGATACTG
GCAAATCCGG GACGTTCGCC GGAGATCGTC TGTACGCTGG TTGCGCACTG TTTCGATTTA
AATTTATCGG ACGTGACGCT GCAAAACTGG CAGCGGCGGA TGGTGGATAT CGAGCCGGAT
CAGCAGAACA GTCTTGGATG TTACACGATT AAAAATGGCG AAAAACTGGC CGGGCGATCG
GTGCTGGGTA ATTTTGTCCT CGGTACGCGG GTTCCCGATC TCAGCGGTAA ATTTCAGTTA
AGTATTAACC ACCTGAGCCG CAAGCAGTTT CTCTCGTTCC TGCCGTCAGG AGAAAATTTT
CTGCCGCTGG CGATGTTTGT CTCCTTCGTC CTGCGCGATC AGCTTGCCTG GGATTTACAC
CTGGGGCTGG CCCCGGATCA GGTGGGGATT ATGCGGCTGG GCGATAACAA GAGCGCGCTG
CTGGGCTGGA CGTCATTTCT CGGCGAGCCG GGAGAGCATC CCTCAGTCAC CATCAGGGTC
AGGGAGTAA
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| Protein sequence | MGGKNRATPA HLSPDDAPAQ DEQRTLREPL FQDACACNFF ALSELLHRLA SEGGETPVLS
LDTPPAQETI RFQADASLGF PVSDVSALEQ DASGLFRMTT TFMGLQGSQS PLPGYYLDHL
AWKSAHEQSP VSDFLDMFSH RLTQFVWHIW RKYRYHVAFR NGGVDAFSQR MYSLVGLGHR
QLRDSLPVNH SKMLAYAGIL ANPGRSPEIV CTLVAHCFDL NLSDVTLQNW QRRMVDIEPD
QQNSLGCYTI KNGEKLAGRS VLGNFVLGTR VPDLSGKFQL SINHLSRKQF LSFLPSGENF
LPLAMFVSFV LRDQLAWDLH LGLAPDQVGI MRLGDNKSAL LGWTSFLGEP GEHPSVTIRV
RE
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