| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1219 |
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| Symbol | |
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| ID | 6873867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1211580 |
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| End bp | 1212992 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642784398 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_002215071 |
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| Protein GI | 198244825 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.192362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTAC GCGACCCGAA TACCTGGATT TCGCACCTGC TGGAAAATCT GCCGGATGAC
AAACTGGCCT GCGCGCTGAA AGACGATGAT CCTGACTGGG AATATATCGA CGGCGAAATG
CTTAAACTCG GCTCGCTGGC GCACAGTCAG CTGGATATCC CGGAAATTCA GCGCCGGGGG
CTGGTGATTC TGGCCTCGGA AAGCAAGGAT TTTCGCCTGC TGGCCCATCT GCTGCGCACC
CTGCAACATG CCGGCGATCC GCTGCTGGCG CTGCGTCTGC TGGCGCTGTA CGTGGAGCAT
TACTGGACGG TGGCGGCACC ACAAAATGCG GCACATAAAC AGCGTTTCGC CACCCAGGTG
CTGAAACGCT TTGAAACCGG CGTGGAGAGT TTCGCAGAGA CAGCCCGTAC CGCGCAGCGC
GACAGCCTGC TGGCTGAACT GGCGAAACTG GCGCAGCGCT GGCAGGAGCA GAATATCCCG
GCGCTGGCAC AGGCCGTCGA TGACCTCTCG TCGCAGTATC GCCGGGCATT TCGCGGGGCC
GCCCCGGTGC CGCCAGCGGC TGGCCCGTCC ACGCCTCCGG CTCCGGTTTC GGCCACGCCG
TCCGCCCCGG TATCCCCGTC TGCGCCTGCG GCGACGACGG CGCCACCGGT GGATATCGAC
AGCCATGACG ACAAAGCCTG GCGCGACACG CTGCTGAAAG TGGCCGCCAT TCTCTGTGAG
CGCCAGCCGG ATTCACCGCA GGGCTACCGC CTGCGCCGCC ATGCGTTATG GCAGGCCATT
ACATCCGTCC CCCAGGCCGA AAGCGACGGG CGCACACCGC TGGCGGCGGT GCCTGCCGAC
ATGACCGCCG ATTACCAGGC GCGGCTGAAC AACGCCGATC TGGCGCTCTG GCAACAGGTG
GAAAAAAGCC TGCTGCTGGC CCCGTACTGG CTCGATGGTC ATTACCTTTC AGCGCAGGCC
GCACAACGCC TGGGCTACAC CAGCGCGGCA GAAGCCATCC GGGATGAGGT GGTTCGCTTT
CTCGCCCGCC TGCCGCAACT TGCCACCCTG CTGTTTAATG ACCGCACACC GTTTATCAGC
GAACAGACAA AACAGTGGCT GGCGGCGTCT CCGGGCAGTC AGACAGCCCC GATGGTGCGG
ACCAGTGAAG ACACCGAGGC CGTCCGCCAG TGTTTCAGCG AGCAGGGGCT GGAGGCCACG
CTGCGATACT TGGAAACCCT GCCGGAAGGC GATCCGCGCG ATCGGTTCCA CCGGCAGTAT
CTTGGCGCGC AACTGTTAGA AGAAGCCGGG ATGGCGCAAC TGGCACAGCA ACAGTACCGG
ATGTTGTTTA AAGCAGGGCT GCGCATGACG CTGGCTGAAT GGGAGCCGTC CCTGCTGGAA
CAACTGGAAA ACAAACTCAC GGCAGAACAG TAA
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| Protein sequence | MDLRDPNTWI SHLLENLPDD KLACALKDDD PDWEYIDGEM LKLGSLAHSQ LDIPEIQRRG
LVILASESKD FRLLAHLLRT LQHAGDPLLA LRLLALYVEH YWTVAAPQNA AHKQRFATQV
LKRFETGVES FAETARTAQR DSLLAELAKL AQRWQEQNIP ALAQAVDDLS SQYRRAFRGA
APVPPAAGPS TPPAPVSATP SAPVSPSAPA ATTAPPVDID SHDDKAWRDT LLKVAAILCE
RQPDSPQGYR LRRHALWQAI TSVPQAESDG RTPLAAVPAD MTADYQARLN NADLALWQQV
EKSLLLAPYW LDGHYLSAQA AQRLGYTSAA EAIRDEVVRF LARLPQLATL LFNDRTPFIS
EQTKQWLAAS PGSQTAPMVR TSEDTEAVRQ CFSEQGLEAT LRYLETLPEG DPRDRFHRQY
LGAQLLEEAG MAQLAQQQYR MLFKAGLRMT LAEWEPSLLE QLENKLTAEQ
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