Gene SeD_A1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1099 
Symbol 
ID6872188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1095791 
End bp1096765 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID642784284 
Producthypothetical protein 
Protein accessionYP_002214958 
Protein GI198243665 
COG category[L] Replication, recombination and repair 
COG ID[COG3728] Phage terminase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0156489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CGGACTGGGG AGCACTGCAA CACCAGTTCC TCGCCGAGCA TGCTAAATCC 
GGTATTTCCC CCAAAGACTG GTGTGAAGCG CAGGGACTGA ATTACGCTAC TGCCCGCCGT 
TACATCAAGA AACCGACTGC GCAAAGTGCG CAAAAAAATG CGCAGAAAAA AATGCGCACT 
GCGCAGGCAA AAAAAAGCGC AGAAAAACTT CTTAATAGTG AACTCACTCC CCAACAAAAA 
CGCTTTGTCG CTGAATACCT CATAGACCAG AACGCAACAG CCGCAGCCGA ACGTGCTGGT 
TACAGTGATG CAAGTTACGG AAGACAGCTC CTCACAGTAC CTCACGTTGC GCAGGAAATT 
GCGCAGCAGC AAAGAGATTC ACTGGTGCGC ACTTTGGCGA GTGCAGATGA AGTACTCGAA 
AAGATGTGGC AGCTCGCTAC GTTCGACGCT AACGAAATCT CGCAATATCG CCGTGGATGT 
TGTCGTTACT GCTGGGGATT TGGCTATCAC TATCAGTGGC GTGATGTGGT CGAGTTCACT 
GAGCAAAAGG AAAAAGTCGC AGGAAAAGAG GGCGCGAAAG AACCGGACGA TGCTGGTGGA 
TACGGCTACA ACCACAACCG CGAGCCTAAC CCTGATTGTC CCCGATGTAA TGGTGATGGT 
GTAGGACGAC CTCATTTCGC TGATACCACC AAATTGTCCC CGATAGCCCG CCTTGCTTAT 
TCCGGTACGA AACTGGTGAA GGGCGGTATC GAGATATCGA CCATCAGTCG CGAAAAAATG 
TTTGAAGCGA TTATGCGGCG CCTGGGGCTG GCTGAATCCG AACTGGCGCA ACGGCTGCTG 
GATCTGGAAA TCCGAAAACG CACCGCCGAA GCCGAACGTC TGGAACAGGA AGTTGAGCTT 
AAGCGTAAAG GCAAGGGCAA AGACGACGAG CCGACAGTGG TCATTAAACT GGTGAATTCT 
CCTGATGGCG ACTGA
 
Protein sequence
MAKPDWGALQ HQFLAEHAKS GISPKDWCEA QGLNYATARR YIKKPTAQSA QKNAQKKMRT 
AQAKKSAEKL LNSELTPQQK RFVAEYLIDQ NATAAAERAG YSDASYGRQL LTVPHVAQEI 
AQQQRDSLVR TLASADEVLE KMWQLATFDA NEISQYRRGC CRYCWGFGYH YQWRDVVEFT 
EQKEKVAGKE GAKEPDDAGG YGYNHNREPN PDCPRCNGDG VGRPHFADTT KLSPIARLAY 
SGTKLVKGGI EISTISREKM FEAIMRRLGL AESELAQRLL DLEIRKRTAE AERLEQEVEL 
KRKGKGKDDE PTVVIKLVNS PDGD