Gene SeD_A1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1032 
Symbol 
ID6874638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1029581 
End bp1030729 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID642784217 
Productputative MFS family transporter protein 
Protein accessionYP_002214891 
Protein GI198244966 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT ATACCCGTCC CGTCATGCTT TTGCTGTGCG GGCTACTTTT GTTGACCCTG 
GCCATTGCGG TACTGAATAC GCTTGTGCCG CTGTGGCTTG CTCAGGCAAA CCTTCCTACC 
TGGCAGGTGG GGATGGTCAG CTCGTCTTAT TTTACCGGCA ATCTGGTCGG GACGTTATTT 
ACCGGGTATT TAATTAAACG CATTGGGTTT AACCGTAGCT ATTATCTTGC CTCGCTGATC 
TTCGCCGCGG GTTGTGTCGG GTTGGGGGGG ATGGTGGGGT TCTGGAGCTG GATGAGCTGG 
CGTTTTATTG CCGGTATCGG CTGCGCCATG ATTTGGGTGG TTGTCGAAAG TGCGTTGATG 
TGCAGCGGAA CCTCGCATAA TCGCGGGCGC CTGCTGGCTG CCTATATGAT GGCCTATTAC 
ATGGGGACCT TCCTTGGACA ATTATTGGTC AGTAAAGTAT CTGGTGAATT GCTGCACGTC 
CTTCCCTGGG TGACCGGAAT GATTCTGGCG GGAATTCTGC CGCTACTCTT TACCCGAATT 
GTAAATCAGC AAACGCAGGC ACGTCATTCC TCTTCTATTA GCGCCATGCT GAAGCTACGC 
CAGGCGCGTC TTGGCGTGAA TGGTTGTATT ATTTCCGGCA TTGTTCTTGG TTCATTATAT 
GGCCTGATGC CGTTATATCT GAAGCATCAG GGGATGGCTA ACGCCAGCAT CGGTTTCTGG 
ATGGCGGTGC TGGTGAGCGC CGGCATTTTG GGGCAATGGC CAATGGGACG TCTGGCGGAC 
AAATTTGGTC GCTTGCTGGT GTTACGCGTA CAGGTATTCG TTGTCATACT CGGTAGTATT 
GCCATGTTAA CCCAGGCGGC GATGGCGCCA GCTCTGTTTA TTCTGGGGGC GGCGGGTTTT 
ACGCTTTATC CCGTCGCAAT GGCCTGGGCC TGTGAAAAAG TCGAACATCA CCAGCTTGTG 
GCAATGAACC AGGCGCTGTT GTTAAGTTAT ACGGTAGGGA GCCTGTTGGG GCCGTCTTTT 
GCTGCGATGT TAATGCAGAA TTATTCAGAT AATCTGCTGT TTATTATGAT CGCCAGCGTA 
TCGTTTATTT ATCTGCTGAT GCTGTTACGT AACGCCGGCC AGACGCCTAA TCCTGTCGCC 
CACATCTGA
 
Protein sequence
MSTYTRPVML LLCGLLLLTL AIAVLNTLVP LWLAQANLPT WQVGMVSSSY FTGNLVGTLF 
TGYLIKRIGF NRSYYLASLI FAAGCVGLGG MVGFWSWMSW RFIAGIGCAM IWVVVESALM 
CSGTSHNRGR LLAAYMMAYY MGTFLGQLLV SKVSGELLHV LPWVTGMILA GILPLLFTRI 
VNQQTQARHS SSISAMLKLR QARLGVNGCI ISGIVLGSLY GLMPLYLKHQ GMANASIGFW 
MAVLVSAGIL GQWPMGRLAD KFGRLLVLRV QVFVVILGSI AMLTQAAMAP ALFILGAAGF 
TLYPVAMAWA CEKVEHHQLV AMNQALLLSY TVGSLLGPSF AAMLMQNYSD NLLFIMIASV 
SFIYLLMLLR NAGQTPNPVA HI