Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1029 |
Symbol | |
ID | 6874116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1025294 |
End bp | 1027738 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784214 |
Product | anaerobic dimethyl sulfoxide reductase chain a |
Protein accession | YP_002214888 |
Protein GI | 198244293 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTA AGATCCCTGA TGCCGTGCTG GCAGCCGAGG TGAGCCGTCG TGGTTTAGTC AAAACCACCG CGATAGGCGG CCTGGCGATG GCCAGTAGCG CATTTACCCT GCCATTTACC CGCATCGCTA ACGCCGCAGA GGCGATAAGC CCGACGAAAA CCGACGAGAA AGTCGTCTGG AGCGCCTGTA CGGTAAACTG TGGCAGCCGT TGTCCGCTAC GTATGCATGT TGTGGATGGC GAAATCAAAT ATGTTGAAAC GGATAATACC GGAAACGATG ATTACGATGG CCTGCACCAG GTTCGCGCCT GCCTGCGCGG TCGTTCTATG CGTCGTCGCG TCTATAACCC GGATCGGCTC AAGTATCCGA TGAAGCGCGT CGGCGCGCGC GGCGAAGGTA AATTTGAGCG TATTAGCTGG GACGAAGCCT ACGATATCAT TGCCACCAAT ATGCAGCGTC TTATCAAAGA GTATGGCAAC GAGTCCATTT ATCTGAACTA TGGCACGGGA ACGCTGGGCG GCACTTTGAC ACGTTCATGG CCGCCAGGAA AAACGCTGGT CGCTCGTCTG ATGAACTGCT GCGGCGGTTA TCTTAATCAC TACGGTGATT ACTCTTCCGC GCAAATCGCA GCGGGTCTGA ACTACACCTA TGGCGGCTGG GCGGATGGCA ATAGTCCGTC CGACATTGAA AACAGTAAGC TGGTGGTATT GTTTGGCAAT AACCCTGGCG AAACCCGCAT GAGCGGGGGC GGTGTAACGT ATTATCTTGA ACAGGCGCGG CAGAAATCAA ACGCGCGGAT GATCATTATC GATCCTCGTT ACACCGACAC CGGCGCCGGT CGCGAAGATG AGTGGATTCC GATTCGTCCA GGTACCGATG CGGCGCTGGT CAATGGTCTG GCATATGTCT TAATCACCGA GAACATGGTC GATCAGCCGT TCCTGGATAA ATATTGCGTT GGTTATGACG AAAAAACCTT GCCTGCCAGC GCGCCGAAAA ACGGTCACTA CAAAGCCTAT ATTCTGGGCC AGGGTAAAGA CGGTATCGCG AAGACGCCGG AGTGGGCGGC GCAAATTACC GGTATCCCGG CGGATCGCAT TATTAAGCTG GCGCGAGAAA TCGGCAGCGC TAAACCCGCC TATATTTGCC AGGGATGGGG ACCACAACGT CATGCTAATG GAGAAATCGC CACGCGCGCC ATCTCGATGC TGGCGATCCT GACGGGTAAT GTTGGGATTA ACGGAGGTAA CAGCGGCGCG CGCGAAGGGT CTTATGCCCT GCCATTTGAA CGTATGCCCA CGTTAGAAAA CCCGGTTGAA ACCAGCATCT CCATGTTTAT GTGGACCGAT GCCATTGAAC GCGGCCCGGA AATGACGGCG CTGCGTGATG GCGTGCGGGG GAAAGATAAG CTGGACGTGC CGATTAAAAT GATCTGGAAC TATGCTGGCA ACTGTTTGAT TAACCAGCAC TCTGAGATTA ACCGCACCCA CGAAATCCTG CAGGATGACA AGAAATGCGA AATGATCGTC GTTATCGACT GTCATATGAC CTCGTCGGCA AAATACGCCG ATATTCTGTT GCCGGATTGC ACTGCTTCTG AGCAGATGGA CTTTGCGCTG GATGCCTCCT GCGGGAACAT GTCTTACGTT ATCTTCACTG ACCAGGCAAT TAAACCGCGC TTCGAGTGTA AGACGATTTA TGAGATGACC AGCGAACTGG CGAAACGTCT TGGCGTGGAA CAACAGTTTA CCGAAGGACG GACGCAAGAA GAGTGGATGC GTCATCTGTA CGAACAGTCG CGTAAATCCA TTCCGAATCT GCCCACCTTT GAGGAGTTCC GTAAGCAAGG CATCTTCAAA CAGCGCGACC CCGAAGGCCA CCATGTCGCC TATAAAGACT TCCGCGAAGA TCCGCAAGCG AATCCACTTA CAACGCCATC GGGCAAGATT GAAATCTATT CACAGGCGTT GGCGGATATC GCCGCTACCT GGGAGCTGCC GGAAGGCGAC GTGATCGATC CATTACCGAT CTACACGCCA GGTTTTGAAA ACTATAACGA TCCGCTAACG GATAAATTCC CGCTGCAGTT GACGGGTTTC CACTATAAAG CGCGTGTGCA TTCCACTTAT GGCAACGTAG ACGTACTGAA AGCCGCCTGT CGCCAGGAAA TGTGGATTAA CCCAATGGAT GCGCAGAAAC GCGGTATCAA CAATGGCGAT AAAGTCCGCA TCTTCAACGA TCGCGGCGAA GTTCATATCG AGGCTAAAGT GACGCCGCGC ATGATGCCGG GCGTGGTCGC TCTGGGAGAA GGCGCATGGT ATGACCCGGA TGCAAAACGC GTGGATCAGG GCGGATGTAT TAACGTACTG ACGACCCAAC GTCCTTCTCC GCTGGCGAAG GGGAACCCGT CACATACGAA CCTCGTTCAG GTTGAAAAGG CGTAA
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Protein sequence | MKTKIPDAVL AAEVSRRGLV KTTAIGGLAM ASSAFTLPFT RIANAAEAIS PTKTDEKVVW SACTVNCGSR CPLRMHVVDG EIKYVETDNT GNDDYDGLHQ VRACLRGRSM RRRVYNPDRL KYPMKRVGAR GEGKFERISW DEAYDIIATN MQRLIKEYGN ESIYLNYGTG TLGGTLTRSW PPGKTLVARL MNCCGGYLNH YGDYSSAQIA AGLNYTYGGW ADGNSPSDIE NSKLVVLFGN NPGETRMSGG GVTYYLEQAR QKSNARMIII DPRYTDTGAG REDEWIPIRP GTDAALVNGL AYVLITENMV DQPFLDKYCV GYDEKTLPAS APKNGHYKAY ILGQGKDGIA KTPEWAAQIT GIPADRIIKL AREIGSAKPA YICQGWGPQR HANGEIATRA ISMLAILTGN VGINGGNSGA REGSYALPFE RMPTLENPVE TSISMFMWTD AIERGPEMTA LRDGVRGKDK LDVPIKMIWN YAGNCLINQH SEINRTHEIL QDDKKCEMIV VIDCHMTSSA KYADILLPDC TASEQMDFAL DASCGNMSYV IFTDQAIKPR FECKTIYEMT SELAKRLGVE QQFTEGRTQE EWMRHLYEQS RKSIPNLPTF EEFRKQGIFK QRDPEGHHVA YKDFREDPQA NPLTTPSGKI EIYSQALADI AATWELPEGD VIDPLPIYTP GFENYNDPLT DKFPLQLTGF HYKARVHSTY GNVDVLKAAC RQEMWINPMD AQKRGINNGD KVRIFNDRGE VHIEAKVTPR MMPGVVALGE GAWYDPDAKR VDQGGCINVL TTQRPSPLAK GNPSHTNLVQ VEKA
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