| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1022 |
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| Symbol | cydD |
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| ID | 6875247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1013411 |
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| End bp | 1015177 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784207 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_002214881 |
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| Protein GI | 198242135 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.134891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CCCGTCAAAA AGAGCTGACC CGCTGGTTAA AACAGCAAAG CGTAATCTCC
CAACGGTGGT TGAATATTTC CCGCCTGTTG GGGTTCATGA GTGGCGTATT AATTGTCGCT
CAGGCCTGGA TCATGGCGCG TATCCTGCAA CATATGATCA TGGAGAACAT TCCACGGGAA
GCGCTGTTGC TCCCTTTTAT CCTGCTGATA CTGGTCTTTG TCCTCCGCGC CTGGGTGGTG
TGGTTGCGCG AGCGCGTCGG TTTTCATGCC GGACAGCATA TTCGCTTTGA GATCCGCCGT
CAGGTGTTGG ATCGTCTGCA GCAAGCCGGC CCTGTCTGGA TTCAGGGCAA GCCCGCCGGT
AGCTGGGCGA CGCTGGTGTT GGAGCAGATT GACGATATGC ATGACTATTA TGCGCGCTAT
CTGCCGCAAA TGGCGCTTGC CGTTTGCGTA CCGCTCTTAA TCGTGGCGGC GATTTTCCCG
TCAAACTGGG CGGCGGCGCT GATTCTGCTG GGCACCGCCC CGCTCATTCC CCTATTTATG
GCAATGGTGG GGATGGGCGC GGCTGACGCC AACCGCCGCA ATTTCCTGGC GCTTGCCCGG
CTAAGCGGCC ATTTTCTTGA CCGTCTGCGC GGGATGGAAA CGCTGCGAAT TTTCGGTCGT
GGAGAAGCGG AAACCGAAAG CATTCGCGCA GCATCGCAGG ATTTTCGTCA GCGCACGATG
GAAGTACTGC GCCTCGCCTT TTTATCTTCC GGCGTGCTGG AATTTTTCAC CTCGCTTTCT
ATTGCGCTGG TCGCCGTTTA TTTTGGCTTC TCTTACCTGG GCGAACTGAA CTTTGGTCAT
TACGGTACCG GCGTGACGCT CGCCGCCGGG TTCCTCGCCT TGATCCTCGC GCCGGAGTTT
TTCCAGCCGT TACGCGACCT CGGCACGTTT TACCATGCTA AGGCGCAGGC GGTTGGCGCG
GCGGATAGTC TGAAGACGTT TCTGGAAACA CCCCTCGCCC ACCCGGCGCG CGGCGAAGTT
GAGCTGGCGG AAAACGAACC TGTAACCATT GACGCAGTCA ATCTTATTAT CACCTCGCCA
GAAGGCAAAA CGCTTGCCGG GCCGCTGAAT TTCTCATTAG CGGCAGGAGA ACGCGCCGTC
CTGGTAGGAC GCAGCGGTTC CGGTAAAAGC TCTCTGTTGA ATGTATTATC CGGTTTTCTC
TCCTATCAGG GCTCTTTGCG TATTAACGGT GTCGAGCTTC GCGATCTCTC GCCGGAATCC
TGGCGCCAGC ATCTCTCCTG GGTCGGACAA AACCCGCAAT TACCTGCAGC GACGCTACGC
GAAAATGTAT TACTGGCGCG CCCGGACGCC AGCGAGCAGG AACTTTATGC CGCGCTTGAC
GCCGCATGGG TAAGCGAGTT TTTACCGCTG CTGCCGCAGG GAGTAGACAC CCCGCTCGGC
AATCATGCCA GCAGACTTTC CGTCGGCCAG GCACAGCGTG TAGCGGTCGC CCGCGCGCTA
CTTAATCCCT GTCAACTGCT ACTGCTGGAT GAACCGGCGG CAAGCCTGGA CGCTCACAGC
GAGCAACGCG TCATGCAGGC GTTAAAAGCG GCGTCAAAAC GCCAGACCAC ATTAATGGTG
ACGCATCAGT TGGAAGATCT CGCCGACTGG GACGCTATCT GGGTTATGCA AGATGGCGCG
ATTGTCGAAC AAGGCAGCTA TGCCGAACTC AGCGCCGCCA ACGGCGCTTT TGCGACGTTA
TTGGCTCACC GTCAGGAGGA TATTTAA
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| Protein sequence | MNKTRQKELT RWLKQQSVIS QRWLNISRLL GFMSGVLIVA QAWIMARILQ HMIMENIPRE
ALLLPFILLI LVFVLRAWVV WLRERVGFHA GQHIRFEIRR QVLDRLQQAG PVWIQGKPAG
SWATLVLEQI DDMHDYYARY LPQMALAVCV PLLIVAAIFP SNWAAALILL GTAPLIPLFM
AMVGMGAADA NRRNFLALAR LSGHFLDRLR GMETLRIFGR GEAETESIRA ASQDFRQRTM
EVLRLAFLSS GVLEFFTSLS IALVAVYFGF SYLGELNFGH YGTGVTLAAG FLALILAPEF
FQPLRDLGTF YHAKAQAVGA ADSLKTFLET PLAHPARGEV ELAENEPVTI DAVNLIITSP
EGKTLAGPLN FSLAAGERAV LVGRSGSGKS SLLNVLSGFL SYQGSLRING VELRDLSPES
WRQHLSWVGQ NPQLPAATLR ENVLLARPDA SEQELYAALD AAWVSEFLPL LPQGVDTPLG
NHASRLSVGQ AQRVAVARAL LNPCQLLLLD EPAASLDAHS EQRVMQALKA ASKRQTTLMV
THQLEDLADW DAIWVMQDGA IVEQGSYAEL SAANGAFATL LAHRQEDI
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