| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1009 |
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| Symbol | |
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| ID | 6872465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1001137 |
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| End bp | 1003083 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784194 |
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| Product | macrolide transporter ATP-binding /permease protein |
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| Protein accession | YP_002214869 |
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| Protein GI | 198244525 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.351129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAT TGCTTGAACT GCGCAATGTG AGTCGCAGCT ACCCCTCCGG AGAAGAGCAG
GTGGCGGTGT TGAAAGATAT CTCCCTGCAA ATCCACGCCG GGGAGATGGT GGCGATCGTC
GGCGTTTCCG GTTCTGGAAA ATCAACGCTG ATGAATATCC TCGGGTGCCT GGATAAACCG
ACCAGCGGCA CTTATCGGGT GGCGGGGCGG GACGTCTCGA CGCTGGACCC GGACGCGCTG
GCGCAGCTGC GGTGTGAGCA TTTTGGCTTT ATCTTTCAGC GCTACCATCT GTTGTCGCAT
TTAACGGCAG CGCAAAATGT TGAAATCCCC GCCGTCTACG CCGGCATTGA ACGCAAAAAA
CGCCAGGCGC GCGCCAGAGA GTTACTTCTG CGGCTGGGAT TAAGCGATCG CGTCGATTAC
CCGCCTTCAC AGCTTTCTGG CGGACAGCAG CAGCGTGTCA GTATTGCCCG CGCGCTGATG
AACGGCGGAC AGGTGATTCT GGCGGATGAG CCGACCGGCG CGCTGGATAG CCATTCCGGC
GAAGAGGTGA TGGCGATTTT GCGCCAACTG CGCGATCGCG GACATACGGT GATCATTGTG
ACGCACGATC CGCTGATTGC CGCCCAGGCG GAGCGGATTA TTGAAATTCA CGATGGCAAG
ATTGTCCATA ATCCGCCCGC GGAGGAAAAG AAACGCGAAC AGGGCGTTGA CGCTGCCGTA
GTTAATACGG CTCCCGGCTG GCGGCAATTT GCCAGCAGCT TTCGCGAAGC GCTGTCAATG
GCGTGGTTAG CGATGGCCGC TAACAAAATG CGTACTTTAC TGACCATGCT GGGAATTATT
ATCGGTATTG CGTCGGTGGT GTCGATTGTG GTGGTCGGCG ACGCCGCAAA ACAGATGGTA
CTGGCGGATA TCCGCGCTAT GGGCACTAAC ACGATTGATA TTCATCCAGG CAAAGATTTT
GGCGACGACA ATCCGCAGTA TCGACAGGCG CTGAAATATG ACGATCTGGT CGCTATTCAG
AAACAGCCGT GGGTTAACTC TGCGACGCCC AGCGTTTCAA AGAGCTTACG TCTTCGCTAT
GGCAATATTG ATATTGCCGT AAATGCTAAT GGCGTCAGTG GCGATTATTT TAACGTTTAC
GGCATGTCCT TTAGGGAGGG GAACACCTTC AATGCTGTAC AGCAACAGGA TCGCGCGCAG
GTGGTGGTGC TGGATGCCAA CACGCGACGC CAGCTATTTC CAAATAAAGC GAATGTCGTA
GGGGAAGTGG TGCTGGTGGG TAATATGCCG GTTATTGTTA TTGGCGTGGC GGAAGAGAAA
CCGTCCATGT ACGGCAATAG CAATCTGTTG CAAGTTTGGT TGCCCTATAG CACGATGTCA
GATCGCATAA TGGGTCAGTC ATGGCTTAAC TCGATCACCG TTCGTGTGAA AGATGGCGTT
GATAGCGATC AGGCTGAACA GCAGCTTACC CGCCTGCTCA CCTTACGCCA CGGTAAAAAA
GACTTCTTCA CCTGGAATAT GGACAGCGTT CTGAAAACGG CTGAAAAAAC CACCTATACT
CTTCAGTTAT TTCTGACGCT GGTGGCCGTC ATTTCGCTGG TTGTCGGCGG CATTGGCGTT
ATGAATATTA TGCTGGTTTC CGTCACCGAG CGAACGCGTG AAATCGGCAT CCGTATGGCG
GTAGGCGCGC GCGCCAGCGA TGTGCTACAG CAGTTTCTTA TTGAAGCGGT GCTGGTTTGC
CTGGTTGGGG GAGCGCTGGG GATTAGCTTG TCGATGTTCA TCGCATTTAT GCTACAGCTT
TTCCTGCCCG GCTGGGAGAT CGGTTTTTCA CTGACTGCGC TGGCGAGCGC GTTTTTATGT
TCGACGTTTA CCGGGATACT GTTTGGCTGG CTACCGGCGA GAAACGCGGC GCGACTGGAC
CCGGTGGATG CGCTGGTAAG GGAGTAA
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| Protein sequence | MTALLELRNV SRSYPSGEEQ VAVLKDISLQ IHAGEMVAIV GVSGSGKSTL MNILGCLDKP
TSGTYRVAGR DVSTLDPDAL AQLRCEHFGF IFQRYHLLSH LTAAQNVEIP AVYAGIERKK
RQARARELLL RLGLSDRVDY PPSQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG
EEVMAILRQL RDRGHTVIIV THDPLIAAQA ERIIEIHDGK IVHNPPAEEK KREQGVDAAV
VNTAPGWRQF ASSFREALSM AWLAMAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV
LADIRAMGTN TIDIHPGKDF GDDNPQYRQA LKYDDLVAIQ KQPWVNSATP SVSKSLRLRY
GNIDIAVNAN GVSGDYFNVY GMSFREGNTF NAVQQQDRAQ VVVLDANTRR QLFPNKANVV
GEVVLVGNMP VIVIGVAEEK PSMYGNSNLL QVWLPYSTMS DRIMGQSWLN SITVRVKDGV
DSDQAEQQLT RLLTLRHGKK DFFTWNMDSV LKTAEKTTYT LQLFLTLVAV ISLVVGGIGV
MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGISL SMFIAFMLQL
FLPGWEIGFS LTALASAFLC STFTGILFGW LPARNAARLD PVDALVRE
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