Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0998 |
Symbol | |
ID | 6874797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 987097 |
End bp | 987927 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642784183 |
Product | N-acetylmuramoyl-L-alanine amidase AmiD |
Protein accession | YP_002214858 |
Protein GI | 198244737 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 101 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC TACTGTGGCT GGTGGGTCTC GCGTTGCTGT TAACAGGCTG CGCGAGCGAA AAAGGAATTA TCGATAAAGA GGGATATCAG CTTGATACCC GACATCGGGC GCAGGCGGCC TATCCGCGCA TTAAAGTCCT GGTGATTCAC TATACGGCGG AAAACTTTGA CGTTTCGCTG GCGACGTTAA CGGGTCGCAA CGTCAGTTCG CATTACCTGA TTCCCGCAAC CCCGCCATTA TATGGCGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AGGATCAGGC CTGGCATGCG GGCGTCAGTT TCTGGCGAGG CGCCACGCGT CTCAATGATA CGTCTATTGG CATTGAGCTG GAAAATCGCG GCTGGCGAAT GTCCGGCGGG GTGAAATCTT TCGCGCCGTT TGAATCCGCG CAAATTCAGG CATTGATTCC GTTAGCGAAG GACATTATCG CGCGCTATGA CATCAAACCG CAGAATGTGG TGGCCCATGC GGATATCGCG CCGCAGCGTA AAGACGATCC CGGCCCGCGC TTCCCGTGGC GCGAGCTGGC GGCACAGGGG ATTGGCGCCT GGCCTGACGC CCAGCGTGTG GCGTTTTATC TGGCTGGACG CGCGCCGTAT ACGCCAGTCG ATACCGCAAC GGTGCTTGCG TTACTCTCGC GCTATGGCTA TGAAGTCAAA GCCGATATGA CGGCGCGCGA GCAGCAGCGG GTGATTATGG CGTTCCAGAT GCACTTCCGT CCGGCGCAAT GGAACGGTAT CGCAGATGCC GAAACGCAGG CGATTGCCGA AGCATTACTG GAGAAGTACG GCCAGGATTA A
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Protein sequence | MKALLWLVGL ALLLTGCASE KGIIDKEGYQ LDTRHRAQAA YPRIKVLVIH YTAENFDVSL ATLTGRNVSS HYLIPATPPL YGGKPRIWQL VPEQDQAWHA GVSFWRGATR LNDTSIGIEL ENRGWRMSGG VKSFAPFESA QIQALIPLAK DIIARYDIKP QNVVAHADIA PQRKDDPGPR FPWRELAAQG IGAWPDAQRV AFYLAGRAPY TPVDTATVLA LLSRYGYEVK ADMTAREQQR VIMAFQMHFR PAQWNGIADA ETQAIAEALL EKYGQD
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