Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0982 |
Symbol | |
ID | 6875543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 972517 |
End bp | 973632 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642784167 |
Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
Protein accession | YP_002214842 |
Protein GI | 198245718 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.156512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCG CCTTAAAGAA AAAATGGCTA TCGGGTCTGG TTGCGGGTGC TCTGATGGTC GTCTCTGTCG GCACGCTCGC TGCCGAACAA AAAACGCTGC ACATTTATAA CTGGTCAGAT TATATCGCGC CGGACACGGT GGCGAACTTT GAAAAAGAGA CCGGGATTAA CGTTATCTAT GATGTCTTTG ACTCTAACGA AGTGCTGGAA GGCAAGTTAA TGGCAGGCAG CACCGGGTTC GATCTGGTGG TGCCATCGGC CAGTTTTCTT GAGCGCCAGC TCACCGCGGG CGTTTTTCAG CCGCTGGATA AAAGCAAACT TCCCGGCTGG AAAAACCTCG ATCCTGAACT GTTGAAACTG GTAGCGAAGC ACGATCCTGA CAACAAATAC GCCATGCCCT ATATGTGGGC CACGACGGGC ATTGGCTATA ACGTTGATAA AGTGAAAGCG GTGCTGGGGG ATGATGCGCC AGTGAATAGC TGGGATTTAG TCCTCAAGCC GGAGAATCTG GAGAAGCTAA AAAGCTGCGG CGTCTCTTTC CTTGATGCGC CTGAAGAAAT TTTTGCCACC GTGCTGAACT ATCTGGGTAA AGATCCGAAT AGCAGCAAAG CGGATGACTA CACCGGCCCG GCAACCGATC TGTTGTTGAA GCTACGGCCA AACATTCGCT ATTTCCACTC CTCGCAATAC ATTAACGATC TGGCTAATGG CGATACCTGT GTAGCCATCG GCTGGGCGGG CGATGTCTGG CAGGCCGCTA ACCGGGCGAA AGAGGCGAAA AATGGCGTCA ATATCTCTTT CTCGATCCCC AAAGAGGGGG CAATGGCGTT TTTTGATGTG TTTGCCATGC CGGCTGACGC CAAAAATAAA GACGAGGCCT ACCAGTTCCT TAATTATCTG CTGCGCCCTG ATGTGATTGC CCATATTTCC GATCACGTTT TCTACGCCAA TGCGAATAAA GAGGCGACGG CGCTGGTCAG CCAGCAGGTG CGCGATAACC CGGGAATTTA TCCGCCGGCG GATGTGCGGG CCAAGTTGTT TACCCTGAAA GTGCAGGAGC CGAAGATTGA TCGCGTCCGC ACCCGCGCAT GGACGAAGGT GAAAAGCGGT AAGTAA
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Protein sequence | MMTALKKKWL SGLVAGALMV VSVGTLAAEQ KTLHIYNWSD YIAPDTVANF EKETGINVIY DVFDSNEVLE GKLMAGSTGF DLVVPSASFL ERQLTAGVFQ PLDKSKLPGW KNLDPELLKL VAKHDPDNKY AMPYMWATTG IGYNVDKVKA VLGDDAPVNS WDLVLKPENL EKLKSCGVSF LDAPEEIFAT VLNYLGKDPN SSKADDYTGP ATDLLLKLRP NIRYFHSSQY INDLANGDTC VAIGWAGDVW QAANRAKEAK NGVNISFSIP KEGAMAFFDV FAMPADAKNK DEAYQFLNYL LRPDVIAHIS DHVFYANANK EATALVSQQV RDNPGIYPPA DVRAKLFTLK VQEPKIDRVR TRAWTKVKSG K
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