Gene SeD_A0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0956 
Symbol 
ID6872049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp950301 
End bp950816 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content39% 
IMG OID642784145 
Producthypothetical protein 
Protein accessionYP_002214820 
Protein GI198245420 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.614629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGT TAGAACGGTT TTTTCTTTTC GTTACGGGTG ACCAACCTGA ACGATTTGAA 
AAAGCAAATA GCAGTTGTGT TGATAGCGTA ATCCTTGATT TAGAAAATGC GGTGTCATCT 
GAGAAAAAAA TAATTGCCAG AGAAAATGCT CTGAATTTCA TGAGTAATGA TGAAAAAGTA 
CTGATTGCTG TACGTGCAAA AATTGTAATA ACTTCACGCC TGGCTGGATC ATATCCTTCT 
GTTGACGGTA TCACAACTGA ATTTATGAAA AACGAGTTGA CAATACAAAA TGCTATTCAC 
TCCTGTAAAA TGGGGTTCAG TGGCAAGGTA TGTATTCACC CTCCACAAAT TTCACATGTA 
AACAGAGCAT TCAGCTATTT AAAACAAGAA ATCGAGTGGG TTCCCCAGAT TATGCGACTG 
GCTCAATATC CCCATGGAGC GTTCAGTCAT GAAGGGCAAA TGGTGGATAA ACCGTTACTG 
GAAAAAGCAA AAAGGATTTT GGCTCATAGC ATTTAG
 
Protein sequence
MQTLERFFLF VTGDQPERFE KANSSCVDSV ILDLENAVSS EKKIIARENA LNFMSNDEKV 
LIAVRAKIVI TSRLAGSYPS VDGITTEFMK NELTIQNAIH SCKMGFSGKV CIHPPQISHV 
NRAFSYLKQE IEWVPQIMRL AQYPHGAFSH EGQMVDKPLL EKAKRILAHS I