Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0928 |
Symbol | |
ID | 6874075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 922438 |
End bp | 923298 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642784121 |
Product | threonine and homoserine efflux system |
Protein accession | YP_002214796 |
Protein GI | 198245156 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGGT CAACACGTAA ACTACCAGTC TGGTTGCCCA TTTTGGTTTT GCTCATTGCC ATGTCCTCTA TTCAGAGTGG CGCTTCACTG GCAAAATCGT TATTTCCTCT TGTCGGCGCG CCGGGCGTAA CGGCGCTTCG TCTGGCGTTG GGAACGCTTA TCCTTATCGC CTTTTTCAAA CCCTGGCGTT TGCGTTTTGC CAAAGAGCAG CGGCTGCCTT TACTGTTTTA TGGTCTGTCG CTGGGCGGGA TGAACTATCT ATTCTATCTG TCGATTCAGA CGGTGCCGTT GGGTATTGCG GTCGCGCTGG AATTTACCGG TCCTCTGGCG GTCGCGCTGT TTTCATCCCG GCGGCCGGTA GATTTTATTT GGGTCGTACT GGCTGTGCTT GGGCTCTGGT TCCTGCTGCC ATTAGGGCAA GATATGTCTC ACGTCGATCT TACCGGGGCC GCGTTGGCGC TCGGCGCTGG CGCCTGTTGG GCTGTCTATA TTCTTACCGG CCAGCGAGCA GGCGCGGAAC ATGGTCCGGC CACGGTGGCG GTAGGCTCGC TGATTGCCGC CATCATTTTC GTGCCGATTG GCGCAGTTCA GGCTGGCGAC GCGCTATGGC ACTGGTCGAT TCTTCCCTTA GGGTTAGCGG TCGCTGTGCT TTCTACGGCG CTGCCTTATT CACTGGAAAT GATTGCACTG ACGCGCCTGC CAACCCGCAC CTTCGGTACG CTGATGAGCA TGGAACCCGC GCTGGGCGAA ACGCTTACGG GCATACAAAT CCTGGCCCTG TGCGCCATCA TTGCCGCCTC AATGGGTTCT ACCCTAACGA TTCGACGCGA ACCGCAAATT AAACAAGTTG ACGTAAAATA G
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Protein sequence | MPGSTRKLPV WLPILVLLIA MSSIQSGASL AKSLFPLVGA PGVTALRLAL GTLILIAFFK PWRLRFAKEQ RLPLLFYGLS LGGMNYLFYL SIQTVPLGIA VALEFTGPLA VALFSSRRPV DFIWVVLAVL GLWFLLPLGQ DMSHVDLTGA ALALGAGACW AVYILTGQRA GAEHGPATVA VGSLIAAIIF VPIGAVQAGD ALWHWSILPL GLAVAVLSTA LPYSLEMIAL TRLPTRTFGT LMSMEPALGE TLTGIQILAL CAIIAASMGS TLTIRREPQI KQVDVK
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