Gene SeD_A0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0906 
Symbol 
ID6872032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp900298 
End bp901260 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID642784099 
Productinner membrane protein YbhN 
Protein accessionYP_002214774 
Protein GI198242256 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.409444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAT CGCATCCGCG CTGGCGGCTG GCTAAAAAAG TGCTGACCTG GCTGTTTTTT 
ATTGCGGTCG TCGTTCTGCT GGTGGTTTAT GCTAAAAAGG TCGACTGGGG CGATGTCTGG
ACCGTCATCC GCGACTATAA CCGCACGGCG CTTTTAAGCG CTGTGGGACT GGTGATCGTT
AGCTATCTTC TGTACGGCTG CTACGACCTG CTTGGACGGC TTTATTGCGG CCATAAACTG
GCGAAGCGAC AGGTGATGTT GGTATCGTTC GTCTGCTATG CCTTTAACCT GACGCTCAGC
ACCTGGGTCG GCGGGATCGG GATGCGTTAC CGACTATACT CTCGCCTCGG GTTGCCCGGC
AGTACTATCA CGCGTATTTT CTCACTCAGC ATTACCACTA ACTGGCTGGG CTATATTCTG
CTTGGCGGCA TCATTTTTAC CTTCGGCATT GTCCAGCTTC CCGACCACTG GTATATCGAT
GAAGGCACGC TACGAATTCT CGGTATCGTT TTATTGTTGA TTATCGCGGT CTATCTGTGG
TTTTGCGCCT TTGCGAAGCG GCGGCATATG ACGATTAAAG GACAGAAACT GGTGCTGCCG
TCATGGAAAT TCGCGCTGGC GCAGATGGCG ATCTCCAGCG CGAACTGGAT GGCGATGGGC
GCCATCATCT GGCTGCTGAT GGGTCAGGAT GTGAACTATT TCTTTGTGCT GGGCGTACTG
CTGGTGAGCA GTATCGCGGG CGTCATCGTG CATATTCCGG CAGGCATCGG CGTGCTGGAG
GCCGTATTCC TCGCGTTGCT GGCGGGCGAA CATACGTCGC AAGGCACGAT TATCGCCGCC
CTGCTCGCGT ACCGTGTGCT TTACTATTTT ATTCCCCTGT TGCTGGCGCT GGTGTGCTAT
CTGATCCTGG AGAGCCGGGC GAAGAAGCTG CGGGCGAAAA ACGAGCGGGC GATGGCGAAA
TGA
 
Protein sequence
MAKSHPRWRL AKKVLTWLFF IAVVVLLVVY AKKVDWGDVW TVIRDYNRTA LLSAVGLVIV 
SYLLYGCYDL LGRLYCGHKL AKRQVMLVSF VCYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LGGIIFTFGI VQLPDHWYID EGTLRILGIV LLLIIAVYLW
FCAFAKRRHM TIKGQKLVLP SWKFALAQMA ISSANWMAMG AIIWLLMGQD VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFLALLAGE HTSQGTIIAA LLAYRVLYYF IPLLLALVCY
LILESRAKKL RAKNERAMAK