Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0892 |
Symbol | bioD |
ID | 6873057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 887277 |
End bp | 887963 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642784087 |
Product | dithiobiotin synthetase |
Protein accession | YP_002214762 |
Protein GI | 198242071 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000165002 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAAAC GCTATTTTGT GACCGGTACT GATACTGAAG TCGGTAAAAC GGTCGCCAGT TGCGCCTTAT TGCAGGCCGC AACGCAGTTA GGTTATCAAA CCGTAGGCTA TAAGCCCGTC GCTTCCGGCA GCGAAATGAC AACCGACGGG CTACGCAATA GCGATGCCCT GGCCTTGCAG CGTAACAGCA GCCTGCCGCA ACCTTATTCC GCTATCAATC CTTATACTTT TGCCGAGCCT ACTTCTCCCC ACATCGCTAG CGCCGACGAA GGCCGGGCGA TAGACGCGGC GGTGTTATCA CGCGGATTAC GAACGCTGGA GGCGCAGGCA GACTGGGTGT TGACAGAAGG GGCGGGCGGC TGGTTTACAC CGCTCTCTGC CACGCTGACG TTTGCCGACT GGGTACAGAC GGAGCAGCTG CCGGTGATTC TGGTTGTTGG CGTCAAGCTG GGCTGTATTA ATCACGCCAT GCTGACGGCG CTGGCGGTAG AACAGGCCGG ATTACCGCTT GTCGGATGGA TAGCCAACGA CATGCAGCCG CCAGGCGCGC GTCATGGTGA ATATCTCGCG ACGCTTCGCC GCGTCATACC GGCCCCGCTG TTAGGGGAAA TCCCGTGGCT GGGCGTTTCT CCATCGCAGG CGGCGACAGG ACAGTATCTG GACCTTAGCC CCCTGGAACG CGCCTGA
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Protein sequence | MTKRYFVTGT DTEVGKTVAS CALLQAATQL GYQTVGYKPV ASGSEMTTDG LRNSDALALQ RNSSLPQPYS AINPYTFAEP TSPHIASADE GRAIDAAVLS RGLRTLEAQA DWVLTEGAGG WFTPLSATLT FADWVQTEQL PVILVVGVKL GCINHAMLTA LAVEQAGLPL VGWIANDMQP PGARHGEYLA TLRRVIPAPL LGEIPWLGVS PSQAATGQYL DLSPLERA
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