| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0891 |
|---|
| Symbol | bioC |
|---|
| ID | 6874358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 886529 |
|---|
| End bp | 887284 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642784086 |
|---|
| Product | biotin biosynthesis protein BioC |
|---|
| Protein accession | YP_002214761 |
|---|
| Protein GI | 198243717 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0441055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG TGAATAAGCA GGCTATTGCG GCGGCGTTTG GCCGGGCCGC ATCGCAATAC
GAACAGCACG CCTCTTTACA GCAACACAGC GCGGATGCGC TGCTGACGCT GTTGACAGGC
CGCCAGTTTG CCAGTGTGTT GGACGCAGGC TGCGGCCCCG GACGTATGAG TCGTTACTGG
CGAGAGCGGG GGAGCGAAGT GACCGCCCTG GATCTTTCGC TGCCGATGCT GCAACAGGCT
CGCGATCGTC AGGCGGCGCA TCACTATTTG CTGGCGGATA TCGAAGCGAT TCCCCATGAC
GCCGGCGTTT TTGACCTGGC CTGGAGCAAC CTGGCGGTCC AGTGGTGCGG CGATTTACGC
GATGCGTTGA GCGAGTTGTA TCGGGTTGTA CGGCCCGGCG GCGTGGTGGC GTTTACCACC
TTGTGCCAGG GGTCGTTGCC GGAGCTGCGT CAGGCATGGC AGGCCGTCGA TAATCGCGCT
CACGCGAATA GCTTTTTGCC GGAAGAGGCC ATTGACCACG CGCTACGCGG CTGGCGGGCG
TCTCGTCATA CTCAGGCGAT GACATTGTGG TTTGAGGATG CCCTGAGCGC GATGCGTTCG
CTCAAAGGCA TTGGCGCCAC CCATCTTCAT GAAGGGCGGG AGACGGATGT ATTAACCCGC
GCCCGGCTTA GACAGATTCA ACTGGCATGG CCGCAGCGGC AGGGGAAATA TCCGCTGACG
TACCACCTTT TTATGGGAGT GATTGAACGT GACTAA
|
|---|
| Protein sequence | MAQVNKQAIA AAFGRAASQY EQHASLQQHS ADALLTLLTG RQFASVLDAG CGPGRMSRYW
RERGSEVTAL DLSLPMLQQA RDRQAAHHYL LADIEAIPHD AGVFDLAWSN LAVQWCGDLR
DALSELYRVV RPGGVVAFTT LCQGSLPELR QAWQAVDNRA HANSFLPEEA IDHALRGWRA
SRHTQAMTLW FEDALSAMRS LKGIGATHLH EGRETDVLTR ARLRQIQLAW PQRQGKYPLT
YHLFMGVIER D
|
|---|
| |