| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0831 |
|---|
| Symbol | sucB |
|---|
| ID | 6875616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 829494 |
|---|
| End bp | 830702 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642784026 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_002214705 |
|---|
| Protein GI | 198243386 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.170406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG TAGATATTCT TGTTCCCGAC CTGCCTGAGT CCGTAGCGGA CGCGACCGTC
GCCACCTGGC ATAAAAAACC GGGCGATGCG GTTGTTCGTG ACGAAGTGCT GGTAGAAATC
GAAACTGACA AAGTGGTACT GGAAGTACCG GCATCAGCGG ACGGCATTCT GGATGCGGTT
CTGGAAGAGG AGGGGACGAC TGTCACCTCT CGCCAGATCC TGGGTCGCCT GCGTGAAGGC
AACAGCGCGG GTAAAGAGAC CAGCGCGAAA TCTGAAGAGA AAGCGTCTAC GCCGGCACAG
CGCCAGCAGG CTTCGCTGGA AGAACAAAAC AACGATGCGC TCAGCCCGGC GATCCGTCGC
CTGCTGGCTG AACACAATCT GGAAGCCAGC GCCATTAAAG GCACTGGTGT GGGTGGGCGT
CTGACCCGTG AAGATGTGGA AAAACATCTG GCGAAAGGCG AGTCTAAAGC ACCCGCTGTT
GAACCTGCAG CGCAACCCGC TCTGGGCGCG CGCGGCGAAA AACGCGTGCC AATGACCCGC
CTGCGCAAGC GCGTGGCCGA GCGTCTGCTG GAAGCGAAAA ATTCCACCGC CATGCTGACG
ACCTTCAATG AAGTCAACAT GAAGCCGATT ATGGATTTGC GTAAGCAGTA TGGCGAAGTG
TTTGAAAAAC GTCATGGTAT CCGCCTGGGC TTTATGTCCT TCTACGTGAA AGCGGTAGTG
GAAGCGCTGA AGCGTTATCC GGAAGTGAAC GCCTCTATCG ACGGCGATGA CGTGGTGTAT
CACAACTACT TTGATGTGAG CATGGCGGTG TCTACGCCGC GCGGCCTGGT CACGCCGGTC
CTGCGTGACG TGGATACGCT GGGCATGGCT GACATCGAGA AAAAAATTAA AGAACTGGCT
GTCAAAGGCC GCGACGGCAA GCTGACCGTA GAAGATCTGA CCGGTGGTAA CTTTACCATT
ACCAACGGCG GCGTATTCGG TTCGCTGATG TCTACCCCGA TCATCAACCC GCCGCAGAGC
GCGATTCTGG GAATGCATGC TATTAAAGAC AGGCCGATGG CGGTGGATGG CAAGGTGGAA
ATCCTGCCGA TGATGTACTT GGCGCTCTCT TACGATCATC GCCTGATCGA TGGTCGTGAA
TCCGTGGGCT TCCTGGTCAC CATCAAAGAG TTGCTGGAAG ATCCGACCCG TCTGCTGTTG
GACGTGTAG
|
|---|
| Protein sequence | MSSVDILVPD LPESVADATV ATWHKKPGDA VVRDEVLVEI ETDKVVLEVP ASADGILDAV
LEEEGTTVTS RQILGRLREG NSAGKETSAK SEEKASTPAQ RQQASLEEQN NDALSPAIRR
LLAEHNLEAS AIKGTGVGGR LTREDVEKHL AKGESKAPAV EPAAQPALGA RGEKRVPMTR
LRKRVAERLL EAKNSTAMLT TFNEVNMKPI MDLRKQYGEV FEKRHGIRLG FMSFYVKAVV
EALKRYPEVN ASIDGDDVVY HNYFDVSMAV STPRGLVTPV LRDVDTLGMA DIEKKIKELA
VKGRDGKLTV EDLTGGNFTI TNGGVFGSLM STPIINPPQS AILGMHAIKD RPMAVDGKVE
ILPMMYLALS YDHRLIDGRE SVGFLVTIKE LLEDPTRLLL DV
|
|---|
| |