| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0777 |
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| Symbol | ubiF |
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| ID | 6874943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 773457 |
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| End bp | 774632 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642783974 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_002214660 |
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| Protein GI | 198242401 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000759163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.821116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGGG GAATGGTCGG CGGCGCGCTG
GCGCTGGGTC TGGCGCAGCA AGGGTTTACG GTGATGGTAA TAGAACATGC CGCGCCTGCG
CCGTTTGTGG CGGACAGCCA GCCTGACGTG CGGATTTCGG CCATTAGCGC GGCATCCGTG
GCGCTGCTCA AGGGACTGGG CGTTTGGGAG GCGGTGCAGG GGATGCGTAG CCATCCTTAT
CGGCGACTGG AGACCTGGGA GTGGGAAAAC GCCCATGTGG TGTTCGACGC CGCTGAACTC
AAGCTGCCGC TGTTAGGCTA TATGGTAGAG AACAACGTCC TGCAACAGGC GCTATGGCAG
GCGCTGGAAG CGCACCCCGG CGTGACGCTG CGCGTTCCGG CTTCACTGGC GGCATTGCAA
CGCCGCCACG ATGGTTATGC GCTGGAACTG GCCGACGGCG AATGTATCAC GCCGAAGTTA
GTGATTGGCG CCGACGGCGC GAATTCGCAG GTTCGGCAAA TGGCGGGAAT TGGCATTCAT
GCCTGGCAAT ATGCGCAGTC GTGTATGCTT ATCACCGTCA AGTGTGAAAA TGCGCCAGGC
GACAGCACCT GGCAGCAGTT TACGCCAACG GGGCCGCGCG CTTTTTTGCC GCTGTTCGAC
GATTGGGCGT CGCTGGTGTG GTATGACGCT CCGGCACGTA TTCGCCAGTT GCAGGGTTTA
TCGATGACGC AATTGCAGGT GGAAATTAAC CAGCACTTTC CGGCGCGTCT GGGGGCGGTG
ATGCCTGTCG CGGCGGGCGC GTTTCCGCTA ACCCGTCGTC ACGCGTTGCA GTATGCGCAA
CCGGGACTGG CGCTGGTAGG CGACGCGGCG CATACCATTC ATCCGCTGGC CGGGCAGGGC
GTCAACCTGG GGTATCGGGA TGTTGATGCG TTGATTGATG TGCTGGCGAG TGCCCGTAGC
TATGGCGAGT CCTGGGCCAG CCATTCGGTG TTGAAACGCT ATCAGACGCG GCGCATGGCA
GATAATTTTA TGATGCAAAG TGGAATGGAT CTGTTTTATG CCGGGTTCAG CAATGAACTG
CCGCCGCTGC GTATTTTACG CAATATGGGG CTGATGGCGG CGCAGCGCGC AGGCGTGCTA
AAACGTCAGG CGCTGAAGTA TGCGTTGGGG TTGTAA
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| Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQQGFT VMVIEHAAPA PFVADSQPDV RISAISAASV
ALLKGLGVWE AVQGMRSHPY RRLETWEWEN AHVVFDAAEL KLPLLGYMVE NNVLQQALWQ
ALEAHPGVTL RVPASLAALQ RRHDGYALEL ADGECITPKL VIGADGANSQ VRQMAGIGIH
AWQYAQSCML ITVKCENAPG DSTWQQFTPT GPRAFLPLFD DWASLVWYDA PARIRQLQGL
SMTQLQVEIN QHFPARLGAV MPVAAGAFPL TRRHALQYAQ PGLALVGDAA HTIHPLAGQG
VNLGYRDVDA LIDVLASARS YGESWASHSV LKRYQTRRMA DNFMMQSGMD LFYAGFSNEL
PPLRILRNMG LMAAQRAGVL KRQALKYALG L
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