Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0522 |
Symbol | |
ID | 6875223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 537848 |
End bp | 541204 |
Gene Length | 3357 bp |
Protein Length | 1118 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642783744 |
Product | potassium efflux protein KefA |
Protein accession | YP_002214431 |
Protein GI | 198242010 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.97346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCAGC TTTATAAACG TTCACAGCAT TTTGTTTTTA TTACAATTAG CGTCCTTATT ATCCTGCTGT CCTGTCAGTC TCTGGCATTT GCCCGGGGGC AAACGAATGG CGACCTGCCG TCAAAAGCGG ATGTGCAAAA CCAGCTGGAT ACGCTGAATA AGCAAAAAGA TCTCTCCGCC CAGGATAAGC TCGTCCAGCA GGACCTTATT GATACGTTAG CTACGCTGGA GAAAATCGAG CGGGTAAAAG AGGAGACCGT ACAGCTACGG CAGAAGGTGG CGCAGGCGCC TGAAAAAATG CGTCAGGCGA CGGCTGCGTT GAATGCGCTG AGCGACGTCG ATAATGATGA TGAAATGCGA AAAACGCTGA GTGCGCTTTC GTTACGTCAG CTTGAGCTGC GCGTGGCGCA GGTACTGGAT GATTTGCAAA ATTCGCAAAA CGATCTTGCC GCTTATAACA GCCAGCTTGT TTCGCTACAG ACCCAGCCTG AGCGCGTGCA AAACGCCATG TATACCGCCT CACAGCAAAT ACAGCAAATC CGTAACCGTC TGGACGGCAA TAACGTCGGC GAAGCCGCGC TTCGCCCCAG CCAACAGGTG TTATTACAGG CACAACAGGC GCTGCTTAAT GCGCAGATCG ACCAGCAACG TAAGAGTCTT GAAGGAAATA CCGTTTTGCA GGACACCCTG CAAAAACAGC GGGATTACGT GACGGCCAAC AGTAATCGCC TTGAACATCA GCTTCAACTT TTACAGGAGG CGGTCAACAG TAAACGACTT ACGCTAACGG AAAAAACGGC CCAGGAGGCC ATTTCGCCGG ACGAAACGGC GCGTATCCAG GCGAACCCGC TGGTAAAACA GGAACTGGAT ATTAACCATC AACTCAGCCA GCGTCTGATT GTCGCGACCG AAAACGGCAA TATGTTGATG CAGCAAAACA TTAAAGTAAA AAACTGGCTC GATCGCGCGC TGCAGTCGGA AAGAAATATC AAAGAACAGA TTGCCGTCTT AAAAGGCAGC CTGTTGCTGT CGCGTATTCT TTATCAACAG CAGCAAACCC TGCCCTCCGC CGACGAACTC GAAGATATGA CCAACCGCAT TGCGGATTTG CGTCTGGAGC AGTTTGAAAT CAACCAGCAG CGTGATGCCT TATTCCAAAG CGATGCCTTT GTCGACAAGC TGGAGGAGGG GCATACCAGC GAGGTGAATG ATGAAGTTCA TGATGCGTTG CTTCAGGTGG TGGAGATGCG CCGTGAGCTA TTGGATCAGC TAAATAAACA GTTGGGTAAC CAGCTGATGA TGGCGATTAA CCTGCAAGTT AACCAGCAGC AGTTGATGAG CGTCTCGAAA AATCTGAAAG CCATTCTGAC GCAGCAGATT TTTTGGGTGA ACAGTAACCG CCCTATGGAC TGGGACTGGC TTAAAGCGTT CCCCCAAACG TTAAAAGAGC AATTCAGCGC CATGAAAATC ACGGTGAACT GGCAAAAAGC CTGGCCCGCG GTATTTATTG CTTTTTTGGC CGGGTTGCCG CTCTTGCTCA TCGCCGGTTT AATCCGCTGG CGTCTGAAAT GGTTAAAAGC GTATCAACAG AAGCTGGCCG CCGCCGTGGG AGCGTTGCGT AACGATAGTC AGCTCAATAC GCCAAAAGCT ATTCTGATCG ATCTGATCCG CGCGCTGCCG GTGTGCCTGA TTATCCTCGC GCTTGGACTG ATCCTGCTGA CCATGCAGCT AAATATCAGC GATCTGCTCT GGGCCTTTAG TAAAAAGCTC GCAATGTTCT GGCTGGTCTT TGGGCTGTGC TGGAAGGTGC TGGAAAAAGA GGGCGTGGCA ATACGCCATT TCGGTATGCC AGCGCAGTTG ACCAGCCACT GGCGTCGCCA GATTGTACGC ATTAGCCTCG CATTGCTGCC GCTGCACTTT TGGTCTGTGG TGGCGGAGTT GTCGCCGCTG AATCTGATGG ATGACGTGCT GGGGCAGGCG GTTATTTTCC TCAATCTGCT GGTCATAACA TTGCTGGTGT GGCCACTGTG CCGGGAAAGC TGGCGCGATA AAGAATCTCA CGGCATTCGA CTGGTGACCG TGACGATTCT TTCCATTATT CCGGTGGCGT TAATGGTATT AACGGCGACC GGCTATTTCT ATACCACCCT GCGCCTGGCG GAGCGCTGGA TTGAAACCGT CTATCTGGTC ATTATCTGGA ACCTGCTTTA TCAAACGGTG CTGCGCGGGT TAAGCGTAGC GGCGCGCCGG ATTGCCTGGC GACGCGCGCT GGCTCGTCGT CAGAACCTGG TAAAAGAGGG AGCGGAAGGC GCGGAGCCAC AGGAAGAACC CGCCATCGCG TTGGAGCAGA TTAACCAGCA AACATTACGT ATCACGATGC TGCTAATGCT TGCCCTGTTC GGCGTTATGT TCTGGGCGAT TTGGTCCGAT TTGATCACCG TATTCAGCTA TCTTGATAGC ATCACGCTGT GGCACTACAA CGGCTCCGAA GCTGGCGCTG CGGTGGTGAA AAGCGTGACG ATGGGCAGCT TGCTATTCGC CATTATTGCC GCGATGGTGG CCTGGGCGCT CATCCGCAAC TTACCCGGCC TGTTGGAAGT GCTGGTGCTT TCACGTCTGA ATATGCGCCA GGGGGCTTCG TATGCGATCA CCACGATCCT TAACTACGTC ATTATCGCTG TTGGCGCGAT GACAGTATTC GGATCGCTCG GCGTCTCGTG GGATAAACTC CAGTGGCTGG CGGCGGCGTT GTCGGTGGGT CTCGGTTTTG GGCTACAGGA GATCTTCGGT AACTTTGTCT CGGGTTTAAT CATCCTCTTC GAACGTCCGG TACGCATTGG CGATACGGTA ACGATCGGCA CCTATTCCGG CACGGTCAGT AAGATTCGTA TTCGCGCCAC CACTATTACC GATTTTGATC GTAAAGAAGT GATCATTCCG AACAAAGCAT TCGTAACGGA GCGGCTGATT AACTGGTCCC TCTCCGATAC CACGACACGT CTGGTGATCC GGCTTGGCGT GGCTTATGGC TCGGATCTGG AGAAAGTGAA AAGAGTCCTG CTACAGGCGG CGATGGAGCA TCCGAAGGTG ATGCACGATC CGGAACCTGC CGTATTCTTC ACCACCTTTG GCGCCAGCAC TCTGGATCAT GAACTGCGTC TGTATGTGCG TGAATTGCGC GATCGTAGCC ATACGGTGGA TGAACTGAAC CGCGCGATCG ATCGACTGTG CCGTGAAAAT GATATCAATA TCGCCTTTAA CCAGCTTGAG GTGCATCTGC ATAACGCGAA GGGCGACGAA GTCACTGAAG TGAAGCGCGA TCTCAACGGC GGCGATCTGG CGCCTACGGC AAGCTAA
|
Protein sequence | MLQLYKRSQH FVFITISVLI ILLSCQSLAF ARGQTNGDLP SKADVQNQLD TLNKQKDLSA QDKLVQQDLI DTLATLEKIE RVKEETVQLR QKVAQAPEKM RQATAALNAL SDVDNDDEMR KTLSALSLRQ LELRVAQVLD DLQNSQNDLA AYNSQLVSLQ TQPERVQNAM YTASQQIQQI RNRLDGNNVG EAALRPSQQV LLQAQQALLN AQIDQQRKSL EGNTVLQDTL QKQRDYVTAN SNRLEHQLQL LQEAVNSKRL TLTEKTAQEA ISPDETARIQ ANPLVKQELD INHQLSQRLI VATENGNMLM QQNIKVKNWL DRALQSERNI KEQIAVLKGS LLLSRILYQQ QQTLPSADEL EDMTNRIADL RLEQFEINQQ RDALFQSDAF VDKLEEGHTS EVNDEVHDAL LQVVEMRREL LDQLNKQLGN QLMMAINLQV NQQQLMSVSK NLKAILTQQI FWVNSNRPMD WDWLKAFPQT LKEQFSAMKI TVNWQKAWPA VFIAFLAGLP LLLIAGLIRW RLKWLKAYQQ KLAAAVGALR NDSQLNTPKA ILIDLIRALP VCLIILALGL ILLTMQLNIS DLLWAFSKKL AMFWLVFGLC WKVLEKEGVA IRHFGMPAQL TSHWRRQIVR ISLALLPLHF WSVVAELSPL NLMDDVLGQA VIFLNLLVIT LLVWPLCRES WRDKESHGIR LVTVTILSII PVALMVLTAT GYFYTTLRLA ERWIETVYLV IIWNLLYQTV LRGLSVAARR IAWRRALARR QNLVKEGAEG AEPQEEPAIA LEQINQQTLR ITMLLMLALF GVMFWAIWSD LITVFSYLDS ITLWHYNGSE AGAAVVKSVT MGSLLFAIIA AMVAWALIRN LPGLLEVLVL SRLNMRQGAS YAITTILNYV IIAVGAMTVF GSLGVSWDKL QWLAAALSVG LGFGLQEIFG NFVSGLIILF ERPVRIGDTV TIGTYSGTVS KIRIRATTIT DFDRKEVIIP NKAFVTERLI NWSLSDTTTR LVIRLGVAYG SDLEKVKRVL LQAAMEHPKV MHDPEPAVFF TTFGASTLDH ELRLYVRELR DRSHTVDELN RAIDRLCREN DINIAFNQLE VHLHNAKGDE VTEVKRDLNG GDLAPTAS
|
| |