| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0409 |
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| Symbol | |
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| ID | 6873870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 432162 |
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| End bp | 433319 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642783640 |
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| Product | beta-lactam binding protein AmpH |
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| Protein accession | YP_002214327 |
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| Protein GI | 198245095 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.225371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.000170283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAACGTA GTCTGCTTTT TACTGCCATG CTGTTTGCGG CATCACTTAC TTCTGTCCAG
GCGGCTCAGC CGATTGCCGA TCCGGTTTTT GCCTCTGATA TCGTTGATCG TTATGCCGAG
CATATCTTTT ATGGTAGCGG CGCCACGGGC ATGGCGCTGG TGGTGATCGA CGGCAATCAA
CGCGTATTTC GTAGTTTCGG TGACACCAGA CCGGGCAATA ATGTTCGTCC ACAGCTTGAT
TCGGTCATTC GTATCGCTTC GCTCACCAAG CTAATGACCA GTGAAATGTT GGTAAAATTG
CTCGATCAGG GAACGGTAAA ATTAAACGAT CCTCTCAGCA AATATGCGCC TCCCGGCGCG
CATGTCCCGA CGTATCAAGG CACGCCGATT ACGTTGGTCA ACTTAGCGAC CCATACCAGC
GCGCTTCCGC GAGAACAGCC CGGCGGCGCG GCGCATCGTC CGGTATTTGT CTGGCCAACC
CGCGAACAAC GCTGGAGCTG GCTCTCCACA GCAACGTTAA AAGTCGCGCC AGGCTCGCAG
GCGGCCTATT CCAATCTGGC GTTCGACCTG TTAGCCGACG CGCTGGCGAC CGCCTCCGGC
AAACCTTATA CGCAACTGTT TGAAGAAAAG ATTACCCGCC CGCTGGGAAT GAAAGACACC
ACGTTTACCC CCTCTCCTGA TCAGTGTAAA CGTCTGATGG TGGCAGAAAA AGGCGCAAGC
CCCTGTAATA ATACGCTGGC TGCCATTGGC AGCGGCGGGG TCTATTCTAC GCCAGGAGAT
ATGATGCGCT GGATGCAACA GTATCTGTCT TCAGATTTTT ATCACCGTAG CCATCAGGCC
GATCGTATGC AAACGTTGAT TTATCAGCGC ACACAGTTAA AGAAAATCAT CGGGATGGAC
GTACCGGGTA AAGCCGACGC GCTCGGTCTG GGCTGGGTCT ATATGGCGCC AAAAGACGGA
CGTCCTGGCA TTATCCAGAA AACAGGAGGC GGCGGCGGTT TTATTACCTA TATGGCGATG
ATCCCGCAAT ATAATATTGG CGCTTTTGTG GTGGTAACCC GTTCCCCCCT CACTCGTTTT
ACCAATATGA GCGACGGGAT TAACGATTTG GTTACTGAGC TAAGCGGCAA TAAACCGATT
GCTATTCCTG CATCCTGA
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| Protein sequence | MKRSLLFTAM LFAASLTSVQ AAQPIADPVF ASDIVDRYAE HIFYGSGATG MALVVIDGNQ
RVFRSFGDTR PGNNVRPQLD SVIRIASLTK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA
HVPTYQGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWSWLST ATLKVAPGSQ
AAYSNLAFDL LADALATASG KPYTQLFEEK ITRPLGMKDT TFTPSPDQCK RLMVAEKGAS
PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYHRSHQA DRMQTLIYQR TQLKKIIGMD
VPGKADALGL GWVYMAPKDG RPGIIQKTGG GGGFITYMAM IPQYNIGAFV VVTRSPLTRF
TNMSDGINDL VTELSGNKPI AIPAS
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