Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0388 |
Symbol | |
ID | 6873160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 405282 |
End bp | 406535 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783622 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002214309 |
Protein GI | 198243972 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000000000000620465 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACACCC CCCTGAACTG GACGACGACA CAACGACATG TGGCGTTTGC CAGCTTTACC AGTTGGATGC TGGATGCGTT TGATTTCTTT ATCCTTGTCT TTGTACTTAG CGATCTCGCC GAATGGTTTC ACGCTTCCGT ATCGGACGTT TCCATTGCGA TTATGCTGAC CCTAGCGGTA CGTCCCATTG GCGCGCTGCT ATTTGGCCGA ATGGCGGAAA AGTACGGACG TCGACCGATA CTGATGCTCA ATATTCTGTT CTTTACGGTG TTTGAACTGC TTTCCGCCTG GTCGCCCACC TTCATGGCAT TTCTGATTTT TCGGGTCATG TACGGCGTGG CGATGGGCGG GATATGGGGC GTCGCGTCAT CACTGGCGAT GGAAACCATT CCCGATCGTT CGCGTGGCCT GATGTCGGGC ATTTTTCAGG CGGGCTATCC CTGCGGCTAT CTGTTCGCCT CGGTTATTTT TGGCCTCTTC TACAGTATGG TAGGCTGGCG CGGTATGTTC CTGATTGGCG CCCTGCCTGT TGTCTTGCTG CCTTATATCT GGTTTAAAGT GCCGGAATCC CCCGTCTGGC TGGCGGCCAG AGCGCGTAAA GAGAATACCG CGCTGCTTCC TGTTCTGCGC AAACAGTGGA AGTTGTGTCT GTATCTGGTG CTGGTCATGG CGTTCTTTAA CTTTTTCAGT CACGGCACGC AGGATCTCTA TCCTACCTTC CTGAAGATGC AGCATGGTTT TGATCCGCAT CTGATCAGTA TCATTGCGAT TTTTTATAAC ATTGCCGCCA TGCTCGGCGG TATTTTCTAC GGTACGCTAT CGGAACGTAT TGGGCGTAAA AAAGCGATCA TGATCGCCGC CTTTCTTGCG CTTCCGGTAC TCCCGCTATG GGCATTTTCC AGCGGATCAT TCACGATTGG CCTGGGCGCG TTCCTGATGC AGTTTATGGT GCAGGGCGCC TGGGGAGTCG TGCCGACCTG GCTGAACGAG CTGGTTCCGG CGAATGCGCG CGCCGTGCTG CCAGGGTTTG TTTACCAACT CGGTAATTTA CTGGCGTCGG TTAATGCGAC GTTACAGGCC CGCATCGCGG AAACGCATGG CGGAAATTAC GGGTTGGCAA TGGCGATCGT GGCTGGCGCG GTGGCTATTT TAATCTGTGT ATTTGTGGCA TTTGGTCGCG AGCCCCGGGG AGTCGTCATC TCCGGTACAG ATAGCGACGC CCTCCCGGAG TCGGCCATCA GTCATCGCAC GTAA
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Protein sequence | MYTPLNWTTT QRHVAFASFT SWMLDAFDFF ILVFVLSDLA EWFHASVSDV SIAIMLTLAV RPIGALLFGR MAEKYGRRPI LMLNILFFTV FELLSAWSPT FMAFLIFRVM YGVAMGGIWG VASSLAMETI PDRSRGLMSG IFQAGYPCGY LFASVIFGLF YSMVGWRGMF LIGALPVVLL PYIWFKVPES PVWLAARARK ENTALLPVLR KQWKLCLYLV LVMAFFNFFS HGTQDLYPTF LKMQHGFDPH LISIIAIFYN IAAMLGGIFY GTLSERIGRK KAIMIAAFLA LPVLPLWAFS SGSFTIGLGA FLMQFMVQGA WGVVPTWLNE LVPANARAVL PGFVYQLGNL LASVNATLQA RIAETHGGNY GLAMAIVAGA VAILICVFVA FGREPRGVVI SGTDSDALPE SAISHRT
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