Gene SeD_A0385 details

Gene Information

• Locus tag: SeD_A0385
• Symbol: cueR
• ID: 6873540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 404253
• End bp: 404717
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642783619
• Product: Cu(I)-responsive transcriptional regulator
• Protein accession: YP_002214306
• Protein GI: 198243865
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02044] Cu(I)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.00000000000075209
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAACATCG GTAAAGCAGC TAAAGCATCG AAAGTCTCGG CCAAAATGAT TCGCTACTAT 
GAACAGATTG GTCTGATTCC CGCGGCAAGT CGGACGGATT CCGGCTATCG GGCCTATACC 
CAGGCTGATG TTAATCAATT GCATTTTATA CGCCGCGCGC GCGACCTCGG TTTTTCAGTT 
GCTGAAATCA GCGACTTACT GAATCTTTGG AATAACCAGT CGCGGCAAAG CGCTGACGTC 
AAACGCCTGG CGCAGACGCA CATTGATGAA CTGGACAGAC GCATCCAGAG CATGCAGCAC 
ATGGCGCAAA CCCTCAAAGC GCTGATTCAC TGCTGCGCTG GCGACGCGCT GCCAGATTGC 
CCCATTCTGC ATACGCTTGG ACAACCTGAC GATAGCGAGC CGGAGGCGCG TACCGGAGCG 
GTATTGCGCC GTCCTCGTCG CCACGGACTG GCAAAGCGTC TGTAA 

 

Protein sequence

MNIGKAAKAS KVSAKMIRYY EQIGLIPAAS RTDSGYRAYT QADVNQLHFI RRARDLGFSV 
AEISDLLNLW NNQSRQSADV KRLAQTHIDE LDRRIQSMQH MAQTLKALIH CCAGDALPDC 
PILHTLGQPD DSEPEARTGA VLRRPRRHGL AKRL