Gene SeD_A0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0270 
Symbol 
ID6874439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp289078 
End bp289644 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID642783515 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_002214209 
Protein GI198242937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000151319 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.726111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAGT TTGTACCCGC AATTTTTCTC GACCGTGACG GCACCATTAA TGTGGATCAC 
GGCTACGTAC ATGAAATCGA TGCATTTGAG TTTATAGACG GCGTTATTGA CGCGATGCGC
GAGCTAAAAA AAATGGGCTA TGCGTTGGTG GTGGTGACGA ACCAGTCCGG AATCGCGCGC
GGCAAATTCA CTGAGGCGCA GTTTGAAACG TTAACCGAAT GGATGGACTG GTCGTTGGCG
GATCGCGATG TTGATTTGGA CGGCATCTAT TATTGTCCTC ACCATCCGCA GGGCAGCATA
GAAGAGTTCC GTCAGGTATG TGATTGCCGC AAGCCGCATC CAGGAATGCT TATCTCGGCG
CGTGATTTTC TGCATATCGA TATGGCGGCT TCTTATATGG TGGGAGACAA GCTGGAAGAT
ATGCAGGCGG CAGCGGCGGC AAATGTCGGG ACAAAAGTGC TGGTGCGTAC GGGCAAACCG
GTCACGGCAG AAGCAGAAAA CGCGGCGGAC TGGGTGTTAA ACAGCCTTGC TGACCTGCCA
TCAGCGATAA AAAAGCAGCA AAAATAA
 
Protein sequence
MAKFVPAIFL DRDGTINVDH GYVHEIDAFE FIDGVIDAMR ELKKMGYALV VVTNQSGIAR 
GKFTEAQFET LTEWMDWSLA DRDVDLDGIY YCPHHPQGSI EEFRQVCDCR KPHPGMLISA
RDFLHIDMAA SYMVGDKLED MQAAAAANVG TKVLVRTGKP VTAEAENAAD WVLNSLADLP
SAIKKQQK