Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0263 |
Symbol | |
ID | 6872845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 282526 |
End bp | 283227 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783508 |
Product | lipoprotein involved with copper homeostasis and adhesion |
Protein accession | YP_002214202 |
Protein GI | 198244299 |
COG category | [M] Cell wall/membrane/envelope biogenesis [P] Inorganic ion transport and metabolism |
COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.327669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGAA CAGCAATATT GTCAGTAGCG GCAGCCTGTA CGCTATTTGC ATTGATAGGG TGTAATAACC GTGCGGAAGT TGACGCCCTG CAACCTGCGC AGGCGGCGGA ATTAAAACCC ATGCAGCAAA GCTGGCGCGG CGTGCTGCCC TGTGCGGATT GTGAAGGTAT TGAAACGTCA CTGTTTCTGG AAAAAGACGG CACATGGGTG ATGAACGAGC GCTATCAGGG CGTGCGCGAA GAACCTTCCT CTTTTGCGTC ATACGGTACC TGGGCGCGGA CGGCGGATAA ACTGGTGTTA ACCGACAGCA ATGGCGAGAA ATCGTATTAT CGCGCGAAAG GCAATGAGCT GGAGATGCTC GACAGAGAAG GCAATCCGGT GGCTTCGCAG CTTAATTATA CGCTTGTGCC TGTTACCGCC AGCCTGCCGG TAACGCCAAT GCCGCTGCGT GGTATGTATG TATACAGGGC CGATGCGGCG ACCTTTACCG ATTGCGCGAC CGGAAAACGG CTGCCGGTCG CCAGTAACGC CCAGCTTGAG TGCGGCTATC TGGCGGCGAA AGGTGAAGCG GAAAAACCGG TGCTGCTGAC GGTAGAAGGG CATTTTGTGT TAGCCGCGAA TCCGGACACG GGCGAGCCGG TAAAAACGCT AATAGCTGAT AAAAATGTGA AGTTTGCGCC GGGTAAAGAT TGCACTCACT AA
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Protein sequence | MVRTAILSVA AACTLFALIG CNNRAEVDAL QPAQAAELKP MQQSWRGVLP CADCEGIETS LFLEKDGTWV MNERYQGVRE EPSSFASYGT WARTADKLVL TDSNGEKSYY RAKGNELEML DREGNPVASQ LNYTLVPVTA SLPVTPMPLR GMYVYRADAA TFTDCATGKR LPVASNAQLE CGYLAAKGEA EKPVLLTVEG HFVLAANPDT GEPVKTLIAD KNVKFAPGKD CTH
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