Gene SeD_A0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0234 
SymboldapD 
ID6874500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp250127 
End bp250951 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID642783480 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_002214174 
Protein GI198244458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.214416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TACAGAACGT TATTGAGACC GCTTTTGAGC GCCGCGCCGA TATTACGCCG 
GCTAATGTAG ATACCGTGAC CCGAGAGGCA GTAAACCAGG TCATTTCTCT ACTTGATTCC
GGCGCGCTGC GTGTCGCAGA AAAAATCGAC GGTCAGTGGG TCACTCACCA GTGGTTGAAG
AAAGCGGTTC TGCTCTCTTT CCGTATTAAC GATAACCAGG TTATCGACGG TGCGGAAAGC
CGCTACTTCG ATAAAGTCCC GATGAAATTC GCTGATTACG ACGAAGCGCG TTTTCAGAAA
GAAGGCTTCC GCGTCGTTCC GCCTGCGGCC GTTCGTCAGG GCGCATTTAT CGCCCGCAAC
ACCGTGCTGA TGCCGTCTTA CGTTAACATC GGCGCCTACG TTGACGAAGG CACCATGGTT
GACACCTGGG CGACGGTGGG TTCCTGCGCG CAGATTGGTA AAAATGTTCA CCTTTCCGGC
GGCGTGGGTA TCGGCGGCGT ACTGGAGCCG CTGCAGGCTA ACCCGACCAT CATTGAAGAC
AACTGCTTTA TTGGCGCGCG TTCTGAAGTC GTGGAAGGCG TCATTGTCGA AGAAGGTTCC
GTCATTTCCA TGGGCGTATA CCTCGGCCAG AGCACCAAAA TCTACGATCG CGAAACCGGT
GAAGTTCACT ATGGCCGCGT ACCGGCGGGC TCCGTGGTCG TTTCCGGCAA CCTGCCGTCA
AAAGACGGTA AGTACAGTTT GTATTGCGCG GTGATCGTGA AAAAAGTCGA CGCCAAAACG
CGTGGTAAAG TGGGCATTAA CGAATTATTG CGCACTATTG ATTAA
 
Protein sequence
MQQLQNVIET AFERRADITP ANVDTVTREA VNQVISLLDS GALRVAEKID GQWVTHQWLK 
KAVLLSFRIN DNQVIDGAES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYLGQ STKIYDRETG EVHYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID