Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0095 |
Symbol | pdxA |
ID | 6873460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 98980 |
End bp | 99969 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642783349 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_002214043 |
Protein GI | 198244575 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.503102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTG CGCAACGCGT TGTTATCACT CCCGGCGAAC CCGCCGGGAT TGGCCCCGAT CTTGTCGTCC AACTGGCGCA ACGCGCGTGG CCGATTGAAC TGGTCGTCTG TGCGGACGGC GCGCTCCTGA CGGAGCGGGC CGCCATGCTC GGCCTGCCCC TCTCGCTTCT CCCTTACTCG CCTGATGTCC CCGCTGCGCC GCAGCCCGCG GGAACGCTGA CCCTATTGCC GGTCTCGCTG CGCGCGCCTG CCATCCCCGG TCAGTTGACG GTAGAAAATG GCCCCTACGT GGTAGAGACG CTGGCGCGAG CGTGTGATGG CTGTCTGAAC GGTGAATTTG CCGCGCTGAT CACAGGCCCC GTGCACAAAG GCGTTATTAA CGACGCAGGC ATTCCGTTTA CCGGTCATAC CGAGTTTTTC GAAGAGCGTT CGCAGGCGAA AAAAGTCGTG ATGATGCTGG CAACCGAAGA ACTTCGCGTG GCGCTGGCGA CCACGCATCT GCCGCTACGG GCGATTGCAG ACGCCATCAC CCCTGCGCTT TTGCACGAAG TGATTGCTAT TTTGCATCAC GATTTGCGGA CCAAATTTGG TATTGCCGAA CCGCGCATTC TTGTCTGTGG CCTGAATCCG CACGCGGGCG AAGGCGGTCA TATGGGCACG GAAGAGATAG ACACCATCAT TCCGGTGCTC GACGAGCTGC GGGCGCAGGG GATGAAACTC AACGGGCCGC TACCTGCTGA TACGCTGTTT CAGCCCAAAT ATCTCGATAA TGCCGACGCG GTGCTGGCAA TGTACCACGA TCAGGGCCTG CCCGTGCTAA AATACCAGGG ATTCGGTCGG GGAGTGAATA TTACGCTCGG CCTACCTTTT ATTCGAACCT CCGTTGACCA CGGCACCGCG CTTGAACTGG CGGGCCGTGG AAAAGCGGAT GTCGGCAGTT TTATTACGGC GCTTAATCTC GCCATCAAAA TGATTGTTAA TACCCAATGA
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Protein sequence | MSSAQRVVIT PGEPAGIGPD LVVQLAQRAW PIELVVCADG ALLTERAAML GLPLSLLPYS PDVPAAPQPA GTLTLLPVSL RAPAIPGQLT VENGPYVVET LARACDGCLN GEFAALITGP VHKGVINDAG IPFTGHTEFF EERSQAKKVV MMLATEELRV ALATTHLPLR AIADAITPAL LHEVIAILHH DLRTKFGIAE PRILVCGLNP HAGEGGHMGT EEIDTIIPVL DELRAQGMKL NGPLPADTLF QPKYLDNADA VLAMYHDQGL PVLKYQGFGR GVNITLGLPF IRTSVDHGTA LELAGRGKAD VGSFITALNL AIKMIVNTQ
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