Gene SeD_A0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0076 
Symbol 
ID6873348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp81542 
End bp82327 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID642783330 
Productcarnitinyl-CoA dehydratase 
Protein accessionYP_002214024 
Protein GI198244072 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT CATTACATCT GACCCGTAAC GGCCCGATCC TGGAAATTAC CCTCGACCGA 
CCTAAAGCGA ATGCCATTGA TGCCAAAACC AGCTTTGCAA TGGGTGAAGC TTTTCTTAAT 
TTCCGTGACG ATCCGGAATT ACGCGTAGCA ATCATTACTG GCGGCGGGGA GAAATTCTTT 
TCTGCTGGCT GGGACTTAAA AGCGGCAGCG GAAGGTGAAG CGCCGGATGC CGATTTTGGT 
CCCGGCGGCT TTGCCGGTTT AACCGAAATA TTTGACCTCG ATAAGCCGGT TATCGCCGCG 
GTGAACGGCT ACGCGTTTGG CGGCGGTTTT GAGCTGGCGT TGGCGGCGGA CTTTATTGTC 
TGCGCCGAAA ACGCCAGCTT CGCGCTGCCG GAAGCAAAGC TAGGCATCGT GCCTGACAGC 
GGCGGCGTTT TGCGCCTGCC TAAGCTGTTG CCGCCGGCTA TCGTCAACGA AATGGTAATG 
ACCGGCAGAC GAATGAGCGC CGAAGAAGCG CTGCGTTGGG GAGTCGTGAA CCGCGTTGTC 
AGCCAGAGCG AACTGATGGA TAGCGCGCGC GAACTGGCGC AACAACTGGT CAATAGCGCC 
CCGCTGGCTA TCGCGGCGCT GAAAGAGATT TATCGCGCGA CCAGCGAAAT GCCGGTAGAA 
GAAGGCTACC GCTACATCCG CAGCGGCGTA CTGAAGCATT ATCCGTCGGT GCTGCATTCA 
GAAGATGCGC TCGAAGGACC GCAGGCATTT GCCGAAAAAC GCGATCCGGT GTGGAAAGGT 
CGTTAA
 
Protein sequence
MSESLHLTRN GPILEITLDR PKANAIDAKT SFAMGEAFLN FRDDPELRVA IITGGGEKFF 
SAGWDLKAAA EGEAPDADFG PGGFAGLTEI FDLDKPVIAA VNGYAFGGGF ELALAADFIV 
CAENASFALP EAKLGIVPDS GGVLRLPKLL PPAIVNEMVM TGRRMSAEEA LRWGVVNRVV 
SQSELMDSAR ELAQQLVNSA PLAIAALKEI YRATSEMPVE EGYRYIRSGV LKHYPSVLHS 
EDALEGPQAF AEKRDPVWKG R