| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0053 |
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| Symbol | ispH |
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| ID | 6874872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 57794 |
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| End bp | 58744 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642783309 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002214003 |
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| Protein GI | 198242816 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.108987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCC TGTTGGCCAA CCCACGCGGT TTTTGCGCCG GGGTAGACCG CGCTATCAGC
ATTGTTGAAA ATGCGCTCGC CATTTACGGC GCGCCAATTT ACGTTCGGCA CGAAGTCGTG
CATAACCGCT ATGTAGTGGA CAGCCTGCGC CAGCGCGGGG CGATCTTTAT AGAGCAAATT
AGCGAAGTGC CGGATGGCGC CATTCTGATC TTCTCCGCTC ATGGGGTTTC CCAGGCGGTG
CGTAACGAGG CGAAAAGCCG CGATCTTACC GTTTTTGACG CCACCTGCCC GCTGGTGACG
AAAGTCCATA TGGAAGTGGC GCGCGCCAGC CGTCGCGGTG AAGAATCTAT TCTCATCGGC
CACGCCGGGC ACCCGGAGGT GGAAGGCACC ATGGGCCAGT ACAGCAACCC GGAAGGGGGG
ATGTACCTGG TTGAGTCGCC AGAGGACGTC TGGACGCTGA ATGTCAAAAA TGAAGGCAAG
CTCTCCTTCA TGACGCAAAC CACGCTTTCC GTGGACGATA CGTCCGATGT GATTGATGCG
CTGCGTAAAC GCTTTCCGAA AATCGTCGGC CCGCGCAAAG ACGATATTTG CTATGCCACT
ACTAATCGTC AGGAAGCGGT GCGGGCGTTG GCGGAGCAGG CTGACGTAGT GCTGGTGGTC
GGCTCGAAAA ACTCTTCTAA CTCTAACCGA TTGGCGGAAC TGGCCCAACG GATGGGAAGA
ACCGCGTTTC TTATCGACGA TGCGGCGGAT ATCCAGGAGG CGTGGGTGAA AGAAGCCGCC
TGCGTCGGCG TCACTGCTGG CGCTTCCGCG CCGGATATTC TGGTGCAGAA TGTTATTGCG
CGTCTGCGCG AGTTTGGCGG CGGCGAAGCC GTCACGCTTG AGGGGCGCGA AGAAAATATT
GTTTTTGAAG TGCCGAAAGA GCTGCGTGTG GATGTTCGTG AGGTCGAATA A
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| Protein sequence | MQILLANPRG FCAGVDRAIS IVENALAIYG APIYVRHEVV HNRYVVDSLR QRGAIFIEQI
SEVPDGAILI FSAHGVSQAV RNEAKSRDLT VFDATCPLVT KVHMEVARAS RRGEESILIG
HAGHPEVEGT MGQYSNPEGG MYLVESPEDV WTLNVKNEGK LSFMTQTTLS VDDTSDVIDA
LRKRFPKIVG PRKDDICYAT TNRQEAVRAL AEQADVVLVV GSKNSSNSNR LAELAQRMGR
TAFLIDDAAD IQEAWVKEAA CVGVTAGASA PDILVQNVIA RLREFGGGEA VTLEGREENI
VFEVPKELRV DVREVE
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