Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0051 |
Symbol | lspA |
ID | 6875299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 56687 |
End bp | 57187 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642783307 |
Product | lipoprotein signal peptidase |
Protein accession | YP_002214001 |
Protein GI | 198246069 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0475146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CACTCTGTTC AACAGGACTA CGCTGGCTAT GGCTGGTAGT AGTCGTGCTG ATTATCGATT TGGGCAGCAA ATACCTGATC CTCCAGAATT TCGCTCTGGG GGATACGGTA GGGCTGTTCC CGTCGCTTAA TCTGCATTAT GCGCGTAACT ACGGCGCGGC TTTTAGCTTC CTGGCGGATA GCGGCGGCTG GCAGCGCTGG TTCTTTGCCG GGATTGCGAT AGGGATCTGC GTAATTCTTT TGGTGATGAT GTATCGCTCG AAAGCGACGC AGAAGCTGAA TAACATCGCT TATGCGTTAA TCATCGGCGG CGCGCTGGGT AACCTGTTCG ACCGCCTGTG GCACGGCTTT GTTGTCGATA TGATCGATTT TTACGTCGGC GACTGGCATT TCGCGACGTT CAACCTTGCC GATAGCGCGA TCTGTATCGG CGCGGCGCTG ATTGTACTGG AAGGCTTTTT GCCGAAGCCG ACAGCGAAAG AACAGGCATA A
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Protein sequence | MSKPLCSTGL RWLWLVVVVL IIDLGSKYLI LQNFALGDTV GLFPSLNLHY ARNYGAAFSF LADSGGWQRW FFAGIAIGIC VILLVMMYRS KATQKLNNIA YALIIGGALG NLFDRLWHGF VVDMIDFYVG DWHFATFNLA DSAICIGAAL IVLEGFLPKP TAKEQA
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