Gene SeD_A0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0003 
SymbolthrB 
ID6873732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2801 
End bp3730 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID642783263 
Producthomoserine kinase 
Protein accessionYP_002213957 
Protein GI198244850 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAG TGTATGCCCC GGCTTCCAGC GCGAACATGA GCGTCGGTTT CGACGTGTTG 
GGCGCAGCCG TCACACCCGT TGACGGCACG TTGCTGGGCG ATGTGGTATC CGTTGAAGCA
GCGAACCATT TCCGTCTGCA TAACCTGGGG CGATTTGCCG ATAAACTGCC GCCGGAGCCG
CGTGAAAATA TTGTTTATCA GTGCTGGGAA CGTTTTTGCC AGGCATTGGG GAAAACCATC
CCGGTGGCGA TGACGCTGGA AAAAAATATG CCGATTGGTT CCGGGTTAGG GTCCAGCGCC
TGTTCCGTCG TCGCCGCGCT GGTCGCGATG AATGAGCACT GCGGCAAACC GTTAAACGAC
ACGCGTCTGT TGGCGCTGAT GGGCGAGCTG GAAGGCCGTA TCTCCGGCAG CATCCATTAC
GATAACGTCG CGCCGTGCTT TCTTGGCGGT ATGCAGCTGA TGATTGAAGA AAACGGCATT
ATTAGTCAGC AGGTGCCGGG TTTTGATGAG TGGCTATGGG TACTGGCTTA TCCGGGCATT
AAAGTTTCCA CCGCAGAAGC ACGGGCCATT TTGCCTGCGC AGTATCGCCG TCAGGATTGC
ATTGCGCATG GACGGCATCT GGCCGGTTTT ATTCACGCCT GTTACTCGCG GCAGCCGCAG
CTTGCCGCCG CGCTGATGAA AGATGTTATT GCCGAACCAT ACCGCGCGCG TTTACTGCCG
GGCTTTAGCC AGGCGCGGCA GGCGGTATCG GAGATCGGCG CGCTGGCGAG CGGGATTTCC
GGGTCGGGGC CGACGCTGTT TGCGCTATGC GATAAACCTG AGACGGCGCA GCGCGTCGCG
GACTGGCTGA GCAAACATTA TCTGCAAAAT CAGGAAGGCT TCGTTCATAT TTGCCGGCTG
GATACGGCGG GCGCACGAGT AGTGGGATAA
 
Protein sequence
MVKVYAPASS ANMSVGFDVL GAAVTPVDGT LLGDVVSVEA ANHFRLHNLG RFADKLPPEP 
RENIVYQCWE RFCQALGKTI PVAMTLEKNM PIGSGLGSSA CSVVAALVAM NEHCGKPLND
TRLLALMGEL EGRISGSIHY DNVAPCFLGG MQLMIEENGI ISQQVPGFDE WLWVLAYPGI
KVSTAEARAI LPAQYRRQDC IAHGRHLAGF IHACYSRQPQ LAAALMKDVI AEPYRARLLP
GFSQARQAVS EIGALASGIS GSGPTLFALC DKPETAQRVA DWLSKHYLQN QEGFVHICRL
DTAGARVVG