Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0002 |
Symbol | thrA |
ID | 6875851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 337 |
End bp | 2799 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642783262 |
Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
Protein accession | YP_002213956 |
Protein GI | 198244353 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGTGT TGAAGTTCGG CGGTACATCA GTGGCAAATG CAGAACGTTT TCTGCGTGTT GCCGATATTC TGGAAAGCAA TGCCAGGCAA GGGCAGGTAG CGACCGTACT TTCCGCCCCC GCGAAAATTA CCAACCATCT GGTGGCGATG ATTGAAAAAA CTATCGGCGG CCAGGATGCT TTGCCGAATA TCAGCGATGC CGAACGTATT TTTTCTGACC TGCTCGCAGG ACTTGCCAGC GCGCAGCCGG GATTCCCGCT TGCACGGTTG AAAATGGTTG TCGAACAAGA ATTCGCTCAG ATCAAACATG TTTTGCATGG TATCAGCCTG CTGGGTCAGT GCCCGGATAG CATCAACGCC GCGCTGATTT GCCGTGGCGA AAAAATGTCG ATCGCGATTA TGGCGGGACT TCTGGAGGCG CGTGGGCATC GTGTCACGGT GATCGATCCG GTAGAAAAAC TGTTGGCGGT GGGCCATTAC CTTGAATCTA CCGTCGATAT CGCGGAATCG ACTCGCCGTA TCGCCGCCAG CCAGATCCCG GCCGATCACA TGATCCTGAT GGCGGGCTTT ACCGCCGGTA ATGAAAAGGG TGAACTGGTG GTGCTGGGCC GTAATGGTTC CGACTATTCC GCCGCCGTGC TGGCCGCCTG TTTACGCGCT GACTGCTGTG AAATCTGGAC TGACGTCGAT GGCGTGTATA CCTGTGACCC GCGCCAGGTG CCGGACGCCA GGCTGCTGAA ATCGATGTCC TACCAGGAAG CGATGGAACT CTCTTACTTC GGCGCCAAAG TTCTTCACCC TCGCACCATT ACGCCCATCG CCCAGTTCCA GATCCCCTGT CTGATTAAAA ATACCGGTAA TCCGCAGGCG CCAGGAACGC TGATCGGCGC GTCCAGCGAC GATGATAATC TGCCGGTCAA AGGGATCTCT AACCTTAACA ATATGGCGAT GTTTAGCGTC TCCGGCCCGG GAATGAAAGG GATGATTGGG ATGGCGGCGC GTGTTTTCGC CGCCATGTCT CGCGCCGGGA TCTCGGTGGT GCTCATTACC CAGTCCTCCT CTGAGTACAG CATCAGTTTC TGTGTGCCGC AGAGTGACTG CGCGCGTGCC CGCCGTGCGA TGCAGGATGA GTTCTATCTG GAGCTGAAAG AGGGGCTGCT GGAGCCGCTG GCGGTTACGG AGCGGTTGGC GATTATCTCT GTTGTCGGCG ACGGTATGCG CACGTTACGC GGCATTTCAG CGAAATTCTT CGCCGCGCTG GCGCGGGCCA ATATCAATAT CGTGGCGATC GCTCAGGGAT CTTCTGAGCG TTCCATTTCT GTGGTGGTGA ATAACGACGA TGCCACCACC GGCGTGCGGG TAACGCACCA GATGCTGTTC AATACCGATC AGGTGATTGA AGTGTTTGTC ATTGGCGTCG GCGGCGTCGG CGGCGCGCTA CTGGAACAGC TTAAACGTCA GCAAACCCGG CTGAAGAACA AGCACATCGA TCTACGCGTG TGCGGCGTGG CGAACTCAAA GGCGTTGCTA ACCAATGTGC ATGGCCTGAA TCTGGACAAC TGGCAGGCGG AACTGGCGCA AGCGAACGCG CCGTTCAATC TGGGACGCTT AATTCGCCTG GTGAAAGAAT ATCATCTACT CAATCCGGTG ATTGTTGATT GCACCTCCAG TCAGGCGGTG GCCGACCAGT ATGCTGACTT CCTGCGTGAA GGATTCCATG TGGTGACGCC GAATAAGAAA GCGAACACCT CGTCGATGGA CTACTACCAT CAGCTACGTT TCGCCGCCGC GCAATCACGG CGCAAATTCT TGTATGACAC CAACGTCGGC GCCGGTTTGC CGGTAATCGA AAACCTGCAA AACCTGCTGA ATGCGGGTGA TGAACTGCAA AAATTTTCCG GCATTCTTTC CGGGTCGCTC TCTTTTATTT TCGGTAAACT GGAAGAGGGG ATGAGTCTCT CACAGGCGAC CGCCCTGGCG CGCGAGATGG GCTATACCGA ACCCGATCCG CGCGACGATC TTTCCGGTAT GGATGTGGCG CGGAAACTGT TGATCCTCGC CCGCGAGACG GGCCGCGAGC TGGAGCTTTC CGATATTGTG ATTGAACCGG TGTTGCCGGA CGAGTTTGAC GCCTCCGGCG ATGTGACCGC CTTTATGGCG CATCTGCCGC AGCTTGACGA CGCGTTTGCC GCCCGTGTGG CGAAAGCTCG TGATGAAGGT AAGGTATTGC GCTATGTGGG CAATATCGAA GAGGATGGCG TGTGCCGCGT GAAGATTGCC GAAGTTGATG GTAACGATCC GCTCTTCAAA GTGAAAAACG GTGAAAACGC GCTGGCGTTC TACAGCCACT ATTATCAGCC CTTGCCGTTG GTGCTGCGCG GCTACGGCGC AGGCAATGAT GTGACGGCGG CGGGCGTGTT TGCCGATCTG TTACGGACCC TCTCATGGAA GTTAGGAGTT TAA
|
Protein sequence | MRVLKFGGTS VANAERFLRV ADILESNARQ GQVATVLSAP AKITNHLVAM IEKTIGGQDA LPNISDAERI FSDLLAGLAS AQPGFPLARL KMVVEQEFAQ IKHVLHGISL LGQCPDSINA ALICRGEKMS IAIMAGLLEA RGHRVTVIDP VEKLLAVGHY LESTVDIAES TRRIAASQIP ADHMILMAGF TAGNEKGELV VLGRNGSDYS AAVLAACLRA DCCEIWTDVD GVYTCDPRQV PDARLLKSMS YQEAMELSYF GAKVLHPRTI TPIAQFQIPC LIKNTGNPQA PGTLIGASSD DDNLPVKGIS NLNNMAMFSV SGPGMKGMIG MAARVFAAMS RAGISVVLIT QSSSEYSISF CVPQSDCARA RRAMQDEFYL ELKEGLLEPL AVTERLAIIS VVGDGMRTLR GISAKFFAAL ARANINIVAI AQGSSERSIS VVVNNDDATT GVRVTHQMLF NTDQVIEVFV IGVGGVGGAL LEQLKRQQTR LKNKHIDLRV CGVANSKALL TNVHGLNLDN WQAELAQANA PFNLGRLIRL VKEYHLLNPV IVDCTSSQAV ADQYADFLRE GFHVVTPNKK ANTSSMDYYH QLRFAAAQSR RKFLYDTNVG AGLPVIENLQ NLLNAGDELQ KFSGILSGSL SFIFGKLEEG MSLSQATALA REMGYTEPDP RDDLSGMDVA RKLLILARET GRELELSDIV IEPVLPDEFD ASGDVTAFMA HLPQLDDAFA ARVAKARDEG KVLRYVGNIE EDGVCRVKIA EVDGNDPLFK VKNGENALAF YSHYYQPLPL VLRGYGAGND VTAAGVFADL LRTLSWKLGV
|
| |