Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4737 |
Symbol | treB |
ID | 6795874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4629505 |
End bp | 4630923 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642778810 |
Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
Protein accession | YP_002149372 |
Protein GI | 197250666 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component [TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG TAAAACAAGC CGATATCGAC CGGCTGATTG ACCTGGTTGG CGGGCGCGAC AACATCGCCA CGGTGAGCCA CTGCATTACT CGCCTGCGCT TTGTGCTCCA CCAGCCCGCG AACGCCAGGC CAAAAGAGAT CGAACAATTG CCAATGGTTA AAGGCTGTTT CACCAACGCC GGGCAATTTC AGGTGGTGAT CGGCACCGAA GTCGGCGATT ACTATAACGC GCTGCTGGAG GCCACCGGCA AAGCGTATGC CGATAAAGAG CAGGCCAAAA AAGCCGCTCG CCAGAACATG AAGTGGCATG AGCAGTTAAT TTCCCACTTC GCGGAGATCT TCTTTCCGCT ACTACCGGCG TTGATCAGCG GCGGTTTGAT CTTAGGCTTT CGTAACGTGA TCGGCGATGT GCCGATGAGC AACGGCCAAA CGCTGGCGCA GATGCATCCG GCGCTAAAAA CGCTTTATGA TTTTTTATGG TTGATCGGCG AAGCGATCTT TTTCTATTTG CCGGTGGGGA TCTGCTGGTC GGCGGTGAAA AAAATGGGCG GCACGCCGAT TCTTGGTATC GTGCTCGGCG TGACGCTGGT GTCGCCGCAG TTGATGAATG CGTATCTGCT GGGCCAGCAA ACGCCGGACG TCTGGAACTT CGGCTTATTT AGCATTGAGA AAGTGGGTTA CCAGGCGCAG GTTATCCCGG CGCTACTGGC AGGGCTGGCG CTTGGGTTTA TTGAAACGCG GTTGAAACGC ATCGTGCCGG ATTATCTCTA CCTGGTCGTC GTCCCGGTTT GTTCGTTGAT ACTGGCCGTC TTTCTCGCCC ACACCTTTAT CGGCCCCTTT GGTCGTATGA TCGGCGACGG CGTGGCCTTT GCGGTACGTT ATCTGATGAC CGGCAGTTTC GCCCCGATAG GCGCGGCGCT GTTCGGCTTC CTGTATGCCC CGCTGGTCAT TACCGGTGTC CACCAGACAA CGCTCGCTAT CGATATGCAG ATGATCCAGA GCATGGGCGG TACGCCAGTC TGGCCGCTGA TTGCGCTGTC GAATATCGCG CAGGCCTCCG CCGTGGTGGG CATCATCATC TCCAGCCGTA AACACAATGA ACGCGAGATC TCCGTTCCTG CCGCCATTTC CGCTTACCTT GGGGTAACCG AACCGGCGAT GTACGGTATC AACCTGAAGT ATCGTTTTCC GATGCTGTGC GCGATGATCG GATCTGGTCT GGCGGGACTG CTCTGCGGTC TGAACGGCGT CATCGCCAAC GGTATCGGCG TGGGCGGCCT GCCGGGCATC CTGTCTATAC CGCCGCGCTA CTGGCAGGTG TACGGCATGG CGATGGTTAT CGCGATCGTT ATCCCGGTGA TTCTGACCAC CTTTATCTAT CAGCGTAAGC ATCGTCAGGG CACATTACAA ATTGTCTAA
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Protein sequence | MSKVKQADID RLIDLVGGRD NIATVSHCIT RLRFVLHQPA NARPKEIEQL PMVKGCFTNA GQFQVVIGTE VGDYYNALLE ATGKAYADKE QAKKAARQNM KWHEQLISHF AEIFFPLLPA LISGGLILGF RNVIGDVPMS NGQTLAQMHP ALKTLYDFLW LIGEAIFFYL PVGICWSAVK KMGGTPILGI VLGVTLVSPQ LMNAYLLGQQ TPDVWNFGLF SIEKVGYQAQ VIPALLAGLA LGFIETRLKR IVPDYLYLVV VPVCSLILAV FLAHTFIGPF GRMIGDGVAF AVRYLMTGSF APIGAALFGF LYAPLVITGV HQTTLAIDMQ MIQSMGGTPV WPLIALSNIA QASAVVGIII SSRKHNEREI SVPAAISAYL GVTEPAMYGI NLKYRFPMLC AMIGSGLAGL LCGLNGVIAN GIGVGGLPGI LSIPPRYWQV YGMAMVIAIV IPVILTTFIY QRKHRQGTLQ IV
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