Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4540 |
Symbol | |
ID | 6795803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4439396 |
End bp | 4441618 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642778629 |
Product | heme lyase subunit NrfE |
Protein accession | YP_002149195 |
Protein GI | 197250247 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1138] Cytochrome c biogenesis factor [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.815854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATAATC TGGACATCTT CCTTCCTGAA GCCGGATTTC TGGCGCTGTT GTTGAGTCTC GGGGTCAACG TGTTGACCCC GCTGGCGACG TGGTGCGGGA TGGGGCTGCA CTGGCGCGGC GTCATGCGCC TGACGACCTG CGGCGCGTGG ACGGCGTTCA CGCTGCTGCT ACTGGCGTTT GCGATTCTGG TTAGCTGTTT TCTGACCAGC GATTTTTCGG TCGTTTATGT TGCGCAGCAT AGCCATAGTC AGTTGTCATG GGGACTGAAA CTGGCGGCGG TATGGGGCGG TCATGAAGGC TCGCTCCTGC TGTGGGCGCT GCTTCTTTCG GGGTGGACGG CGCTATTCGC CTGGCGCTCC CGGCATGAAT CTGACGCGCT TTTTCCGCTG ACCCTGAGCA TCTTGTCCCT CATTATGGCT TCGCTGCTGC TATTTATTGT GCTGTGGTCC GATCCGTTCC TGCGTATTTT CCCTCCCGCC ATGGAAGGGC GCGACCTTAA TCCCATGCTG CAACATCTGG GGCTGATCTT ACATCCGCCG CTGCTCTATC TGGGTTATGG CGGCCTGATG ACCGCGGCGA GCGTAGCGCT GGCCTCGCTA CTGTGCGGCG GCTTTAACGC GGCAACCGCC TGGGTGTGCT GGCGCTGGGC GTTACCCGGC TGGTGCGCTC TGACGCTGGG GATTATTCTC GGATCGTGGT GGGCGTATTG CGAACTGGGC TGGGGCGGCT GGTGGTTCTG GGACCCGGTG GAAAATGCCT CGTTGTTGCC GTGGCTTGCC GCCAGCGCGT TGCTGCACAG TCTGTATGTC AGCCGCCAGC GCGGGAGCTT CCGTCACTGG TCGTTGCTGC TGGCGATACT GACGCTGATC CTCTCGTTGC TGGGAACGCT GATTGTGCGT TCCGGCATTC TTGTTTCGGT ACATGCTTTT GCGTTAGATA ACGTGCGCGC GGTGCCGCTG TTTACCCTTT TTGCCGCGTT AAGTCTGGCA TCGCTTGCTC TGTACGGCTG GCGGGCGCGG GAGCCGTATC CGGCGACGCG TTTGGGCGGC GGAAAGTGCG AAACGCTCAT TCTGACGACG CTGCTGCTCT TTAGCGCCGT CTTGTTGATC GTGCTGGTCG GGACGCTCTA CCCCATGATT TATGGTTTGA TGGGCTGGGG AAGGCTTTCG GTGGGCGCGC CCTATTTTAA TCGCGTCACG CTGCCGTTTG GCCTGCTGAT GCTGGTGGTT ATCGTACTGG CGACAATCAG AAGCCGCAAA GTCTCTGTGC ATCGTCAGCT TCCGGCATTG CTGGCGCATA CGGGCGTATT TATCTTCGCC GCCGGGATCA TGGTTTCCAG CGGCAGTCGG CATGAAATCA GTCTTAACCT CAGCCCGGGG CAGCAGGTGG TACTGGCGGG CTATACCTTT TGTTTCGAGC GTCTGGATCT GGAAGCCAAA GGCAACTACA CCAGTGAAAA AGCGCTGATC ACGTTGTGGC GGAATGAAAA ACGCATTGGC AGCCTGCAGC CTGAAAGGCG CTTTTATGTC GCGCGGCGCC AACAGATGAT GGAGCCGGGG ATTCACTGGA ACCTGCTACA TGACTGGTAC GCGGTGATGG GCGAAAAAAC CGGACCGGAT CGTTACGCCA TGCGCTTATA CGTGCAGACC GGCGTGCGCT GGATCTGGGG TGGGGGATTG TTGATGGTGT GTGGCGCGCT GCTGAGCGGA TGGCGGGGGA GGAAGCATCC TGAGTTATTG CCTGATGGCG CTGCGCTTAT CAGGCCTACG AGTGAAAAGG ATGGTAGGCC GGATAAGGCG TTTACGCCGC CATCCGGCAA GACGATGTTA CTTGTGGCTT TTCTGATTTT TCTGCCTTTT AGCACCCACG CCCAGGTGGT GGATACCTGG CGCTTTGACA ATCCGCAACA GCAGGAAAAA GCGCTATCTA TTGCCAGTCA ACTGCGCTGT CCGCAGTGTC AGAACCAGAA TTTGCTGGAA TCCAATGCGC CCGTGGCGGT CAGTATGCGC CATCAGGTTT ACAGCATGGT GGCCGAAGGT AAAAGCGAAG CGGAAATCAC CGCCTGGATG ACCGACCGTT ATGGTGATTT CGTACGCTAC AACCCGCCGT TGAATGAGCA AACGCTGCTG TTGTGGGCGC TGCCGTACCT GCTGTTATTG CTGGTGGGCG TGGTGGCCTG GCGGGTGAGA AAGCGTCAGC ACGCAGGAGA GGGGGAACAA TGA
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Protein sequence | MHNLDIFLPE AGFLALLLSL GVNVLTPLAT WCGMGLHWRG VMRLTTCGAW TAFTLLLLAF AILVSCFLTS DFSVVYVAQH SHSQLSWGLK LAAVWGGHEG SLLLWALLLS GWTALFAWRS RHESDALFPL TLSILSLIMA SLLLFIVLWS DPFLRIFPPA MEGRDLNPML QHLGLILHPP LLYLGYGGLM TAASVALASL LCGGFNAATA WVCWRWALPG WCALTLGIIL GSWWAYCELG WGGWWFWDPV ENASLLPWLA ASALLHSLYV SRQRGSFRHW SLLLAILTLI LSLLGTLIVR SGILVSVHAF ALDNVRAVPL FTLFAALSLA SLALYGWRAR EPYPATRLGG GKCETLILTT LLLFSAVLLI VLVGTLYPMI YGLMGWGRLS VGAPYFNRVT LPFGLLMLVV IVLATIRSRK VSVHRQLPAL LAHTGVFIFA AGIMVSSGSR HEISLNLSPG QQVVLAGYTF CFERLDLEAK GNYTSEKALI TLWRNEKRIG SLQPERRFYV ARRQQMMEPG IHWNLLHDWY AVMGEKTGPD RYAMRLYVQT GVRWIWGGGL LMVCGALLSG WRGRKHPELL PDGAALIRPT SEKDGRPDKA FTPPSGKTML LVAFLIFLPF STHAQVVDTW RFDNPQQQEK ALSIASQLRC PQCQNQNLLE SNAPVAVSMR HQVYSMVAEG KSEAEITAWM TDRYGDFVRY NPPLNEQTLL LWALPYLLLL LVGVVAWRVR KRQHAGEGEQ
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