Gene SeAg_B4372 details

Gene Information

• Locus tag: SeAg_B4372
• Symbol: btuB
• ID: 6796896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4266944
• End bp: 4268788
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642778472
• Product: vitamin B12/cobalamin outer membrane transporter
• Protein accession: YP_002149051
• Protein GI: 197249135
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0258695
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAA AAGCTACGCT GCTGACGGCG TTCTCCGTCA CGGCCTTTTC CGCTTGGGCG 
CAGGACACTA GCCCGGATAC CCTGGTTGTC ACCGCCAACC GTTTTCAGCA GCCGCGCAGC 
GCGGTTCTGG CGCCCGTTAC CATCGTGACG CGTCAGGATA TTGAACGCTG GCAATCGACC 
TCCGTAAATG ATGTTCTGCG CCGTTTGCCT GGCGTCGATA TTGCGCAGAG CGGCGGCGCC 
GGACAAAACT CCTCCATTTT CATTCGCGGC ACCAACTCCA GCCATGTACT GGTATTGATT 
GACGGCGTGC GTCTGAATTT AGCAGGCGTG AGCGGGTCCG CCGATCTCAG CCAGTTCCCG 
GTGTCGCTGG TACAGCGCAT TGAATATATT CGCGGTCCGC GCTCCGCTAT TTATGGTTCC 
GATGCTATCG GCGGCGTAGT GAATATCATT ACGACGCGCG ATAACCCAGG CACAGAATTA 
ACCGCTGGAT GGGGAAGCAA TAGCTACCAG AATTACGACA TCTCGACGCA ACAGCAACTT 
GGCGAAAACA CGCGGGCGAC GTTGATCGGC GATTACGAAT ACACCAAAGG GTTTGACGTG 
GTAGCGAAAG GCGGTACCGG GATGCAGGCG CAGCCTGACC GGGACGGCTT TTTGAGTAAA 
ACGCTTTATG GCGCGTTAGA GCATACCTTT TCTGATCGCT GGAGCGGATT CGTGCGTGGT 
TATGGCTATG ATAACCGTAC CGATTACGAC GCTTATTACT CGCCGGGCTC GCCGCTGATT 
GATACACGCA AACTTTATAG CCAAAGCTGG GATGCCGGGC TGCGCTTTAA TGGCGAACGT 
ATTCAGTCTC AGCTGGTTTC AAGCTATAGC CACAGTAAAG ATTACAACTA TGATCCGCAC 
TATGGCCGGT ATGATACCTC CGCCACGCTG GATGAGATGA AACAGTACAA TGTTCAATGG 
ACCAACAGTG TGGTCGTGGG GCACGGTAAT GTTGGGGCGG GCGTAGACTG GCAGAAGCAG 
ACTACCACGC CAGGTACCGG CTATGTGCCC GAGGGATATG ACCAGCGTAA TACCGGGGTT 
TACCTGACAG GATTACAACA GTTGGGTGAC TTCACTCTGG AAGCGGCGGC GCGCAGTGAT 
GACAACTCCC AGTTTGGCCG TCATGGTACA TGGCAAACCA GCGCAGGATG GGAGTTTATA 
GAAGGTTACC GCTTTATTGC CTCCTACGGA ACCTCCTACA AAGCGCCTAA TTTGGGCCAA 
CTGTATGGTT ATTACGGTAA TCCGAACCTG AATCCTGAAA AGAGTAAACA GTGGGAAGGC 
GCATTTGAAG GGCTAACCGC TGGCGTCAGC TGGCGTATTT CAGGTTATCG TAACGATATT 
AATGACATGA TCGATTATGA CGATCATCTG CAAAAATATT ACAACGAAGG TAAGGCGCGC 
ATTAAAGGTA TTGAGGCGAC GGCGAATTTC GATACCGGAC CGTTAACGCA TACGGTCAGT 
TACGATTACG TTGATGCGCG TAATGCGATT ACCGATACGC CATTACCGCG GCGTTCCAAA 
CAGATGGCAA AATATCAACT TGACTGGGAC GTTTACGATT TTGACTGGGG GGTGACATAT 
CAATACCTTG GTTCCCGCTA TGATTCGGAT TACTCCGCTT ACCCATACCG GACAGTAAAA 
ATGGGCGGCG TCAGTTTATG GGATCTTACG GTTGCATATC CGGTCACCTC ACATCTGACA 
GTTCGTGGTA AAATAGCCAA CCTGTTCGAC AAAGATTACG AGACAGTTTA TGGCTACCAA 
ACTGCAGGAC GAGAATACAC CTTGTCTGGC AGCTACACCT TCTGA 

 

Protein sequence

MIKKATLLTA FSVTAFSAWA QDTSPDTLVV TANRFQQPRS AVLAPVTIVT RQDIERWQST 
SVNDVLRRLP GVDIAQSGGA GQNSSIFIRG TNSSHVLVLI DGVRLNLAGV SGSADLSQFP 
VSLVQRIEYI RGPRSAIYGS DAIGGVVNII TTRDNPGTEL TAGWGSNSYQ NYDISTQQQL 
GENTRATLIG DYEYTKGFDV VAKGGTGMQA QPDRDGFLSK TLYGALEHTF SDRWSGFVRG 
YGYDNRTDYD AYYSPGSPLI DTRKLYSQSW DAGLRFNGER IQSQLVSSYS HSKDYNYDPH 
YGRYDTSATL DEMKQYNVQW TNSVVVGHGN VGAGVDWQKQ TTTPGTGYVP EGYDQRNTGV 
YLTGLQQLGD FTLEAAARSD DNSQFGRHGT WQTSAGWEFI EGYRFIASYG TSYKAPNLGQ 
LYGYYGNPNL NPEKSKQWEG AFEGLTAGVS WRISGYRNDI NDMIDYDDHL QKYYNEGKAR 
IKGIEATANF DTGPLTHTVS YDYVDARNAI TDTPLPRRSK QMAKYQLDWD VYDFDWGVTY 
QYLGSRYDSD YSAYPYRTVK MGGVSLWDLT VAYPVTSHLT VRGKIANLFD KDYETVYGYQ 
TAGREYTLSG SYTF