Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4248 |
Symbol | gph |
ID | 6793810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4145330 |
End bp | 4146748 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642778356 |
Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
Protein accession | YP_002148935 |
Protein GI | 197248647 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGACC ATGATCCGCT AACGCTAAAA CTAAGCTTGA AAGAAAAACT CGCTTACGGT GCGGGTGATA TTGGCTCTAA TCTAATGCTA AGCATTGGCA CATTATATTT GCTCAAGTTT TACACAGATG AGCTAGGAAT GCCTGCATAT TATGGCGGGG TTATTTTCCT CATAGCAAAA TTCTTTACTG CATTTACAGA TATGCTAACC GGATTTCTTC TCGATTCTCA AAAAAACATT GGAATCAGAG GGAAATTTAG ACCTTTCATT CTGTATGCAG CAGTACCATC AGCAATTATT GCGACAGTTC AGTTTATTGC TACAACATTT AGTCTGCCGA TAAAGACCGC TATTGCTACC GGTCTATTTA TGTTATTCGG ACTGTTTTAC AGTCTAATGA ACTGTTCATA TGGCGCTATG ATCCCAGCAA TAACAAAAAA TCCAAATGAA CGCGCACAAC TGGCAGCTTT TCGGCAGGGA GGGGCAACAA TAGGATTATT AATCTGTACG GTTGCTTTTA TTCCACTTCA ATCTTTATTC TCTACAACTA CCATTGGTTA TGGTTATGCA GCCTTAACTT TCTCTATCTT TGGTTTCATT TTTATTATGT TATGTTATAA AGGAACCAAA GAACATTACA TTGAGCCCCC ATCGCCGGGA CATAAGGCAA GCATCATCAA ATCATTTTGT GCAATTTTTC ACAACCCACC ACTATTAGTT CTATGCATTG CAAATTTGTG TACACTAGCA GCATTTAATA TCAAGCTCGC TATTCAGGTT TATTATACCC AATATGTACT AAATGACATT AACCTATTAT CCTGGATGGG TTTTTTTAGT ATGGGCTGTG TAATTATTGG TGTTTTGTTA GTTCCCTGGA CCGTAAAATG CTTTGGCAAG AAACGCGTGT ATTTAGCAGG TATGCTTTTA TGGGCCGCGG GCGATGTTTT AAATTATTTT TGGGGTTATA ACTCCTTTTA TTTTGTCATT TTCTCTTGTA TCGCCTTCTT CGGTACCGCT TTCGTCAACA GCCTGAACTG GGCGCTGGTT CCGGATACGG TTGACTACGG TGAATGGAAA ACGGGTATTC GCGCTGAAGG CTCGGTGTAT ACGGGTTACA CCTTTTCCCG CAAAATTTCC GCTGCGCTTG CTGGCTTTTT GCCAGGTATT ATGCTGACGC AAATCGGTTA TATCCCCAAC ATAGCTCAAA GTGACACCAC GTTGCTTGGT TTGCGTCAGC TCATTTTTTT ATGGCCTTGC GGTCTTGCCA TTATCGCAGC ACTAACGATG GGCTTTTTTT ATAAGCTCAA TGAACAACGT TTCGCTTTTA TTATCGAGGA AATTGCCCAA CGAAAGAAAA CAGGTAATCA AATTGTCGCG ACTAATAATA AACAAAGTAT TTCTACTGTA AATAATTAA
|
Protein sequence | MPDHDPLTLK LSLKEKLAYG AGDIGSNLML SIGTLYLLKF YTDELGMPAY YGGVIFLIAK FFTAFTDMLT GFLLDSQKNI GIRGKFRPFI LYAAVPSAII ATVQFIATTF SLPIKTAIAT GLFMLFGLFY SLMNCSYGAM IPAITKNPNE RAQLAAFRQG GATIGLLICT VAFIPLQSLF STTTIGYGYA ALTFSIFGFI FIMLCYKGTK EHYIEPPSPG HKASIIKSFC AIFHNPPLLV LCIANLCTLA AFNIKLAIQV YYTQYVLNDI NLLSWMGFFS MGCVIIGVLL VPWTVKCFGK KRVYLAGMLL WAAGDVLNYF WGYNSFYFVI FSCIAFFGTA FVNSLNWALV PDTVDYGEWK TGIRAEGSVY TGYTFSRKIS AALAGFLPGI MLTQIGYIPN IAQSDTTLLG LRQLIFLWPC GLAIIAALTM GFFYKLNEQR FAFIIEEIAQ RKKTGNQIVA TNNKQSISTV NN
|
| |