Gene SeAg_B4148 details

Gene Information

• Locus tag: SeAg_B4148
• Symbol: rfbB2
• ID: 6792454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4051426
• End bp: 4052493
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642778263
• Product: dTDP-glucose 4,6-dehydratase
• Protein accession: YP_002148851
• Protein GI: 197251098
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCA TTCTGGTGAC CGGCGGCGCA GGCTTTATCG GATCTGCGGT GGTGCGGCAT 
ATCATCCATG AAACGGCAGA CGCGGTGGTG GTGGTGGATA AACTCACCTA TGCGGGCAAC 
CTGATGTCTC TGGCGTCGGT GGCGCAAAGC GACCGTTTCG CCTTTGAGAA GGTGGATATC 
TGCGATCGGG CATCACTGGA GCGAGTTTTC CAGCAGTATC AGCCCGATAG CGTGATGCAC 
CTGGCGGCGG AAAGCCATGT AGACCGTTCC ATCGACGGCC CGGCGGCGTT TATTGAAACG 
AATATCGTTG GTACTTACAC CTTGCTGGAA GCCGCTCGCG CTTACTGGTC CGCGCTTGAC 
GCGGACGCTA AAGCGGCGTT CCGCTTCCAC CATATCTCCA CCGATGAAGT GTATGGCGAT 
CTGCATACTG CAGACGATTT CTTCACCGAA ACCACGCCAT ATGCGCCAAG CAGTCCTTAT 
TCCGCCTCCA AAGCCAGCAG CGACCATCTG GTACGCGCCT GGTTACGTAC CTACGGTCTG 
CCTACGCTTG TCACCAACTG CTCTAATAAC TACGGGCCCT ACCATTTCCC GGAAAAACTG 
ATCCCGCTGA TGATTCTGAA CGCGCTGGCG GGTAAACCAT TGCCGGTCTA TGGCAACGGT 
CAGCAAATTC GCGACTGGCT GTATGTAGAG GATCATGCCC GTGCGTTGTA TCACGTGGTG 
ACGAACGGTG CGGTGGGCGA AACGTATAAT ATCGGTGGTC ATAACGAACG TAAAAATCTG 
GATGTGGTCA GGACGATCTG CGCTCTGCTG GAAGAACTGG CCCCGCAAAA ACCGCAGGGT 
GTAGCGAATT ATCACGATCT GATTACCTTC GTCGACGATC GACCCGGCCA TGACTTACGT 
TATGCCATCG ACGCGTCGAA AATCGCCCGC GAGCTGGGCT GGACGCCGCA GGAAACCTTC 
GAAAGCGGGA TGCGAAAAAC CGTTCAGTGG TATCTCGCCA ATGAGGCCTG GTGGAAACCC 
GTGCAGGATG GCAGTTATCA GGGCGAACGC TTAGGTCTGA AACGCTAA 

 

Protein sequence

MKRILVTGGA GFIGSAVVRH IIHETADAVV VVDKLTYAGN LMSLASVAQS DRFAFEKVDI 
CDRASLERVF QQYQPDSVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWSALD 
ADAKAAFRFH HISTDEVYGD LHTADDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL 
PTLVTNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYHVV 
TNGAVGETYN IGGHNERKNL DVVRTICALL EELAPQKPQG VANYHDLITF VDDRPGHDLR 
YAIDASKIAR ELGWTPQETF ESGMRKTVQW YLANEAWWKP VQDGSYQGER LGLKR