Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4115 |
Symbol | |
ID | 6794783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4016633 |
End bp | 4017337 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642778231 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002148825 |
Protein GI | 197251408 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000173473 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTAA GCGCACAACA ATTAGCCGCA CAGAAAAATC TATCCTATGT TCTGGCTGAA AAGCTGGCGC AGCGGATATT AAAGGGTGAC TACGCCCCCG GTACGATTCT TCCCGGCGAA ATAGAACTGG GCGAGCAGTA CGGCGTAAGT CGAACGGCAG TTCGCGAAGC GGTGAAAACG TTGACGGCTA AAGGTATGGT GCTACCCCGT CCGCGCATTG GTACGCGGGT AATGCCGCAG GGAAACTGGA ACTTTCTGGA TCAAGAGCTG CTGACCTGGT GGATGACGGA AGAAAATTTT CATCAGGTGG TAGATCATTT TCTGGTGATG CGTATTAGCC TGGAGCCGCA AGCCTGCCTG CTGGCGGCGA CTCTTGGCAC ACCGGAGCAG AAAGCGCGGC TTAATGCCTT AATGGAAGAG ATGGTCGCGC TGAAAAAGCA TTTTAAGCGT GAACGCTGGA TTGAAGTGGA TATGGCGTGG CACGAGCATA TCTACGAAAT GAGCGCCAAT CCCTTTCTAA TCTCTTTTGC TACGCTATTT CATTCGGTTT ATCACACTTA CTTTACCTCA ATCACCTATA ACGAGGTGGT AAAGCTGGAT TTGCACCAGG CCATTGTTGA TGCCATCGCT GATGGCGACG GCGAACGCGC TTTCCAGGCC TGCCAGGCGT TGTTAATAGC GCCCAATGAG AGACCAGATA ATTAA
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Protein sequence | MPLSAQQLAA QKNLSYVLAE KLAQRILKGD YAPGTILPGE IELGEQYGVS RTAVREAVKT LTAKGMVLPR PRIGTRVMPQ GNWNFLDQEL LTWWMTEENF HQVVDHFLVM RISLEPQACL LAATLGTPEQ KARLNALMEE MVALKKHFKR ERWIEVDMAW HEHIYEMSAN PFLISFATLF HSVYHTYFTS ITYNEVVKLD LHQAIVDAIA DGDGERAFQA CQALLIAPNE RPDN
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