| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4047 |
|---|
| Symbol | ccmA |
|---|
| ID | 6796127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3942465 |
|---|
| End bp | 3943091 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642778163 |
|---|
| Product | cytochrome c biogenesis protein CcmA |
|---|
| Protein accession | YP_002148757 |
|---|
| Protein GI | 197248109 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGA TGCTTGAAGC CAGAGATCTG TACTGCGAGC GGGACGAGAG GACGCTGTTT
CGCGGGCTGT CGTTCACCGT GGACGCCGGG GAGTGGGTGC AGGTCACCGG CGGCAACGGC
GCGGGAAAAA CCACCCTGCT GCGCCTGCTG ACCGGGCTGG CGCGCCCGGA CGGCGGCGAG
GTGTACTGGC AGGGCGAACC CCTGCGCCGC GTGCGCGACA GCTTCCATCG CAGCCTGCTG
TGGATAGGGC ACCAGCCGGG GATTAAATCC CGCCTGACGG CGCGGGAGAA CCTGCACTTC
TTCCACCCCG GCGACGGCGC GCGTCTCCCG GAGGCGCTGG CGCAGGCCGG GCTGGCGGGA
TTTGAGGACG TGCCGGTCGC CCGGCTCTCG GCCGGGCAGC AGCGCCGGGT GGCGCTGGCC
CGCCTGTGGC TGACCCGCGC CGCGCTGTGG GTACTCGACG AACCGTTCAC CGCCATTGAC
GTTAACGGCG TGGCGCGCCT CACCCGGCGG ATGGCGGCGC ACACGGCGCA GGGCGGGATG
GTCATTCTCA CCACCCACCA GCCGCTGCCG GGGGCCGCGG ACACCGTCCG CCGCCTGGCG
CTGACCGGCG GGGAGGCGGG GCTGTGA
|
|---|
| Protein sequence | MTMMLEARDL YCERDERTLF RGLSFTVDAG EWVQVTGGNG AGKTTLLRLL TGLARPDGGE
VYWQGEPLRR VRDSFHRSLL WIGHQPGIKS RLTARENLHF FHPGDGARLP EALAQAGLAG
FEDVPVARLS AGQQRRVALA RLWLTRAALW VLDEPFTAID VNGVARLTRR MAAHTAQGGM
VILTTHQPLP GAADTVRRLA LTGGEAGL
|
|---|
| |