Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3878 |
Symbol | malS |
ID | 6793967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 3768344 |
End bp | 3770371 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642777998 |
Product | periplasmic alpha-amylase precursor |
Protein accession | YP_002148593 |
Protein GI | 197250004 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTG CCGCCTTCGC TCTGACGCTG ATACCCGGTA TCGCGATCGC CTCATCATGG ACCTCACCCG GTTTTCCAAC GTTCTCGACG CAGGAAACCG GACGCTTTAC CAGCCATGCT GCATTAACAA AAGGTACACG CGCGTTAACG CTCCATATTG ACCAGCAGTG CTGGCAGCCC TCCGGCGCCA TAAAACTCAA CCAAATGTTG TCGTTAAAAC CCTGCGAAGG CGCGCCACCG CAATGGCGTT TGTTTAAAGA TGGCGACTAT ACGATAACGG TAGATACCCG CTCCGGTACG CCGACCCTGT TGTTATCGAT AAAAACTGAA CCTGAACGCA CCGCGCAGCT CGCCTACCAG TGTCCCGTCT GGGATGGTTC GCCGCTCACG CTGGATGTTC GCCAGACCTT TCCGGAAGGG ACGGTAGTGC GCGATTATTA CAGTGGTCAA ACCGATACCG TCCAAAACGG GCAAATCACG CTGCAACCTG CCGACAGCCA CGGGCTTTTA TTGCTGGAAC GCGCGGAAAC CCATGCGTCA GCGCCTTTTA ACTGGCGCAA CGCCACCGTT TATTTTGTGC TTACGGATCG CTTTCGCAAT GGCGATCCAA CCAATGACCA CAGCTATGGT CGCCATAAGG ATGGTATGCA AGAGATTGGC ACTTTCCACG GCGGCGATTT ACGCGGGTTG ACGAGTCAAC TGGACTATCT ACAGCAATTA GGCGTGAACG CCTTGTGGAT AAGCTCGCCG TTTGAACAGA TCCACGGCTG GGTCGGCGGC GGAACAAAAG GCGATTTTCC TCATTACGCC TATCACGGCT ATTACACTCA GGACTGGACG ACGCTGGATG CCAATATGGG CAGCGAAGCC GATCTCCGCG CGCTGGTCGA CGGCGCGCAC CAGCGCGGCA TCCGTATTTT ATTTGACGTA GTAATGAATC ATGCCGGTTA CGCCACGCTG GCGGATATGC AGGAGTATCA GTTCGGCGCG CTCTATTTAT CCGGCGCGGA ACGGCAAAAA ATTCTCGGCG ATCGCTGGAC AAACTGGCGA CCCGCCGCCG GACAAAGCTG GCACAGCTTT AACGACTACA TCAACTTCAG CGACAGCGCC GCCTGGGAAA AATGGTGGGG AAAAAAGTGG ATTCGTACCG ATATTGGCGA CTACGACAGT CCGGGATTTG ACGATTTAAC CCTGTCGCTG GCCTTCCTGC CGGATATAAA AACGGAATCT ACCACGCCTT CCGGCCTACC CGTGTTCTAT GCCAACAAAT CCGATACTAA AGCAAAGTTC ATTGAAGGCT ATACGCCACG GGATTATCTG ACTCACTGGT TAAGCCAGTG GGTGCATGAT TACGGCATTG ACGGGTTCCG GGTCGATACT GCCAAAAACG TTGAGCTTCC TGCCTGGCAA CAGCTAAAAA CCCAGGCCAG CGCGGCGTTA CATGAATGGA AGCAGGCCAA TCCGGACAAA GCGCTGGATA ATAGCCCGTT CTGGATGACT GGCGAAGCGT GGGGCCACGG CGTCATGAAA AGTGATTATT ATCGCTATGG TTTCGACGCG ATGATCAATT TTGATTATCA GGAGCAGGCG GCGAAAGCGG TCGATTGCCT GGCGGAAATG GGGCCAGTCT GGCAGCAGAT GGCGGATAAA ATGCAGGATT TCAACGTATT AAGTTACCTC TCCTCGCATG ATACGCGCCT TTTCCGTGAG GGCGGTGATA AGGCGGCGGA ACTGCTGCTG CTTTCGCCGG GCGCGGTGCA GATCTTTTAC GGCGATGAAT CCGCTCGTCC CTTCGGCCCC ACCGGCTCCG ACCCGCTGCA AGGCACCCGT TCAGATATGA ACTGGCAGGA CGTGAGCGGA AAGTCAGCCG CAGCCGTCGC GCACTGGCAG CGTATTAGCC AGTTCCGCGC CAGACATCCC GCCATCGGCG CAGGCCAACA AACCACGCTG ACGCTAAAAC ACGGGTACGG TTTTGTACGC CAGTACGGCG ACGATACGGT GATGGTCGTC TGGGCGGGCC GCCGCTAA
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Protein sequence | MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT LHIDQQCWQP SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT PTLLLSIKTE PERTAQLAYQ CPVWDGSPLT LDVRQTFPEG TVVRDYYSGQ TDTVQNGQIT LQPADSHGLL LLERAETHAS APFNWRNATV YFVLTDRFRN GDPTNDHSYG RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL GVNALWISSP FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR PAAGQSWHSF NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL AFLPDIKTES TTPSGLPVFY ANKSDTKAKF IEGYTPRDYL THWLSQWVHD YGIDGFRVDT AKNVELPAWQ QLKTQASAAL HEWKQANPDK ALDNSPFWMT GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM GPVWQQMADK MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL TLKHGYGFVR QYGDDTVMVV WAGRR
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