Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3875 |
Symbol | xylA |
ID | 6796471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3764280 |
End bp | 3765602 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642777995 |
Product | xylose isomerase |
Protein accession | YP_002148590 |
Protein GI | 197249264 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGCTT ATTTTGACCA ACTCGATCGT GTTCGCTATG AAGGCCCTCA ATCGACTAAC CCGCTGGCAT TTCGTCATTA CAATCCCGAC GAGCTGGTTT TAGGTAAACG TATGGAAGAT CACCTGCGTT TCGCGGCCTG TTACTGGCAT ACCTTCTGCT GGAACGGCGC GGATATGTTT GGTGTAGGCG CGTTTAATCG TCCGTGGCAG CAACCGGGCG AAGCGCTGGA GCTGGCGAAA CGCAAAGCGG ACGTGGCGTT TGAATTTTTC CACAAACTGA ATGTGCCTTT TTATTGCTTC CATGACGTGG ATGTGTCGCC GGAAGGCGCG TCGTTGAAAG AATATAAAAA CAACTTCGCG CAGATGGTGG ATGTGCTGGC GGCGAAACAG GAACAGAGCG GCGTAAAACT GCTGTGGGGA ACGGCGAACT GCTTTACCAA CCCGCGCTAT GGCGCAGGCG CCGCCACTAA CCCGGATCCA GAAGTCTTTA GCTGGGCAGC GACGCAAGTG GTTACGGCAA TGAACGCCAC GCATAAACTG GGCGGCGAAA ATTACGTCCT GTGGGGCGGG CGCGAAGGTT ATGAAACGTT GCTGAATACC GATCTGCGCC AGGAACGCGA ACAGATTGGC CGCTTTATGC AAATGGTGGT CGAGCACAAA CATAAAATGG GTTTCCAGGG CACGCTGCTG ATTGAACCGA AACCGCAGGA ACCGACAAAA CATCAGTATG ATTATGACGT TGCAACGGTC TATGGCTTCC TCAAACAGTT CGGCCTGGAA AAAGAGATCA AAGTGAACAT TGAGGCGAAC CACGCGACGC TGGCGGGCCA TTCGTTCCAC CATGAAATCG CGACCGCTAT CGCGCTGGGT ATTTTTGGCT CCGTTGACGC CAATCGTGGC GATGCGCAAC TGGGCTGGGA TACCGATCAG TTCCCGATTA GCGTTGAAGA GAACGCGCTG GTGATGTACG AAATCCTGAA AGCGGGCGGA TTCACGACGG GCGGTCTCAA CTTCGACGCC AAAGTTCGTC GCCAGAGCAC CGATAAATAC GATCTGTTCT ACGGTCATAT CGGCGCGATG GATACGATGG CGTTGTCGCT GAAAATCGCC GCGCGTATGG TTGAAGACGG CGAGCTGGAT AAACGCGTGG CGAAGCGCTA TGCCGGTTGG AATGGCGAGC TGGGTCAGCA GATTCTGAAA GGACAACTCT CCTTAGGCGA ACTGGCGCAG TATGCGGAGC AGCATAATCT GGCGCCAGTA CATCAAAGCG GTCATCAGGA GCTGTTAGAA AATCTGGTTA ACCGTTATCT GTTTGATAAA TAA
|
Protein sequence | MQAYFDQLDR VRYEGPQSTN PLAFRHYNPD ELVLGKRMED HLRFAACYWH TFCWNGADMF GVGAFNRPWQ QPGEALELAK RKADVAFEFF HKLNVPFYCF HDVDVSPEGA SLKEYKNNFA QMVDVLAAKQ EQSGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMNATHKL GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKMGFQGTLL IEPKPQEPTK HQYDYDVATV YGFLKQFGLE KEIKVNIEAN HATLAGHSFH HEIATAIALG IFGSVDANRG DAQLGWDTDQ FPISVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM DTMALSLKIA ARMVEDGELD KRVAKRYAGW NGELGQQILK GQLSLGELAQ YAEQHNLAPV HQSGHQELLE NLVNRYLFDK
|
| |