Gene SeAg_B3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3786 
SymbolnikR 
ID6794206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp3668578 
End bp3669015 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID642777911 
Productnickel responsive regulator 
Protein accessionYP_002148507 
Protein GI197251873 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGAC GCGCCATACC AAAAGGTTTA AGTCAGATGC AACGTGTCAC CATCACCCTC 
GATGACGATT TACTGGAAAC GCTGGACAGC CTGAGCCAGC GACGCGGCTA TAACAATCGC 
TCCGAAGCGA TCCGTGATAT TTTGCGCGGC GCTCTGGCGC AGGAGGCCAC CCAGGAACAC 
GGTACACAGG GTTTCGCGGT ACTTTCATAT GTTTATGAAC ATGAGAAACG GGATTTAGCC 
AGCCGCATCG TCTCCACCCA GCATCATCAT CATGATTTAT CCGTCGCCAC GCTGCACGTC 
CATATCAACC ACGATGACTG TCTGGAGATC GCCGTTCTGA AGGGCGATAT GGGCGACGTA 
CAGCATTTTG CCGATGATGT TATCGCCCAG CGCGGCGTGC GCCACGGCCA CTTGCAGTGT 
TTGCCGAAAG AAGACTAA
 
Protein sequence
MRRRAIPKGL SQMQRVTITL DDDLLETLDS LSQRRGYNNR SEAIRDILRG ALAQEATQEH 
GTQGFAVLSY VYEHEKRDLA SRIVSTQHHH HDLSVATLHV HINHDDCLEI AVLKGDMGDV 
QHFADDVIAQ RGVRHGHLQC LPKED