| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3561 |
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| Symbol | cafA |
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| ID | 6796393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 3456148 |
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| End bp | 3457617 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642777692 |
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| Product | ribonuclease G |
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| Protein accession | YP_002148294 |
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| Protein GI | 197251153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.026013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTG AATTGTTGGT AAACGTAACG CCATCGGAAA CGCGCGTGGC GTACATTGAT
GGCGGTATTC TTCAGGAAAT CCATATTGAG CGCGAAGCGC GACGCGGAAT CGTAGGCAAT
ATCTACAAAG GTCGTGTAAG TCGTGTACTT CCAGGTATGC AGGCGGCTTT TGTAGATATT
GGGCTGGATA AAGCCGCATT TCTTCATGCT TCCGACATTA TGCCGCATAC CGAATGCGTG
GCAGGCGACG AGCAAAAACA GTTTACCGTG CGCGATATCT CCGAACTAGT GCGTCAGGGA
CAGGATCTGA TGGTGCAGGT AGTGAAAGAT CCGCTCGGCA CGAAAGGCGC GCGTTTGACC
ACGGACATCA CGTTGCCCTC CCGTTACCTT GTTTTTATGC CCGGCGCGTC ACACGTTGGC
GTTTCCCAGC GTATCGAAAG CGAAAGTGAA CGCGAGCGCC TGAAAAAGGT GGTGGCGGAA
TACTGCGACG AACAGGGCGG GTTTATTATC CGTACCGCGG CGGAAGGCGT GTGTGAAGAG
GATCTCGCGT CTGACGCCGC CTATCTCAAG CGCGTCTGGA CGAAAGTCAT GGAGCGCAAA
AAGCGTCCGC AAACGCGCTA CCAGATGTAT GGCGAACTGG CGCTGGCGCA GCGCGTGCTG
CGCGATTTCG CCGATGCGCA GTTGGACCGA ATTCGCGTCG ACTCACGTCT GACCTATGAG
TCGCTGCTGG AGTTTACCGC AGAATACATC CCGGAAATGA CCAGTAAGCT GGAGCATTAC
AGTGGCCATC AGCCGATCTT CGATCTTTAT GACGTGGAAA ATGAGATCCA GCGCGCGCTG
GAGCGTAAGG TTGAACTCAA GTCCGGCGGT TATCTGATTA TCGACCAAAC CGAAGCGATG
ACGACGGTAG ATATCAATAC CGGCGCGTTT GTCGGACACC GTAATCTCGA CGACACCATT
TTTAATACCA ATATTGAAGC GACTCAGGCC ATTGCCCGCC AGCTACGCCT GCGTAATCTG
GGCGGCATTA TCATTATCGA TTTTATCGAC ATGAATAATG AAGATCATCG CCGCCGGGTG
CTGCATTCGC TGGAACAGGC GTTAAGTAAG GATCGCGTGA AAACCAGTAT TAACGGTTTT
TCGCCGCTGG GACTGGTGGA AATGACCCGT AAACGGACTC GTGAAAGCGT GGAACATGTG
CTTTGTAACG AATGTCCAAC CTGTCATGGC CGCGGGACGG TAAAAACGGT GGAAACCGTC
TGCTATGAGA TCATGCGTGA AATTGTACGT GTTCATCACG CTTATGACTC CGATCGCTTC
CTGGTTTATG CTTCTCCTGC GGTGGCGGAA GCGCTGAAAG GCGAAGAATC ACACGCGCTG
GCGGAAGTCG AAATCTTTGT CGGCAAACAG GTTAAAGTTC AGGTCGAACC GCTTTATAAC
CAGGAGCAGT TTGACGTCGT AATGATGTAA
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| Protein sequence | MTAELLVNVT PSETRVAYID GGILQEIHIE REARRGIVGN IYKGRVSRVL PGMQAAFVDI
GLDKAAFLHA SDIMPHTECV AGDEQKQFTV RDISELVRQG QDLMVQVVKD PLGTKGARLT
TDITLPSRYL VFMPGASHVG VSQRIESESE RERLKKVVAE YCDEQGGFII RTAAEGVCEE
DLASDAAYLK RVWTKVMERK KRPQTRYQMY GELALAQRVL RDFADAQLDR IRVDSRLTYE
SLLEFTAEYI PEMTSKLEHY SGHQPIFDLY DVENEIQRAL ERKVELKSGG YLIIDQTEAM
TTVDINTGAF VGHRNLDDTI FNTNIEATQA IARQLRLRNL GGIIIIDFID MNNEDHRRRV
LHSLEQALSK DRVKTSINGF SPLGLVEMTR KRTRESVEHV LCNECPTCHG RGTVKTVETV
CYEIMREIVR VHHAYDSDRF LVYASPAVAE ALKGEESHAL AEVEIFVGKQ VKVQVEPLYN
QEQFDVVMM
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