| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3216 |
|---|
| Symbol | ubiH |
|---|
| ID | 6796528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3135466 |
|---|
| End bp | 3136644 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642777366 |
|---|
| Product | 2-octaprenyl-6-methoxyphenyl hydroxylase |
|---|
| Protein accession | YP_002147972 |
|---|
| Protein GI | 197248952 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0245585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA TTATCGTTGG CGGCGGCATG GCAGGCGCGA CGCTGGCGCT GGCCATCTCT
CAGTTCAGTC ATGGGACGTT GCCGGTACAC CTGATTGAAG CGAAAGCGCC TGAAGCCGAC
GGTCATCCCG GCTTTGACGC CAGAGCGATT GCGCTGGCGG CGGGCACTTG TCAGCAACTG
GCGCGAATTG GCGTCTGGCA GGCGATTTCC GATTGCGCAA CGGCAATCAA CACCGTACAC
GTCAGCGATC GCGGCCATGC CGGATTTGTG ACTCTCGACG CGCAGGACTA CAGTCTGGCA
GCGTTGGGGC ACGTTGCGGA GCTGCATGAT ATCGGGCTGC GTCTGTTTGC GCTCTTGCGT
AAAGCGCCAG GCGTTACGCT GCACTGCCCG GAGCGCGTAG CCAGCGTGTC GCGTACCCAA
CAGCAGGTTA ACGTCACTCT GGAAAACGGC AATGTGATAG CTGGCAGCGT GCTGGTGGCG
GCTAACGGTA CCCACTCCGC GCTCGCGTCA GCCTGCGGCG TTGACTGGCA TCAGGAGCCT
TACGAACAGT TAGCGGTGAT AGCGAATGTC GCGACCGCTA TCCCGCATCA GGGACGCGCC
TTTGAACGTT TTACTCCCAA TGGCCCGCTG GCGATGTTGC CGATGTCGCA TGGCCGATGT
TCGCTGGTTT GGTGTCACCC GCTCGACCAG CGCGATGAGG TGCTGAGCTG GTCCGACGCG
CAGTTCTGCC ATGCATTGCA GGCCGCGTTC GGCTGGCGGC TGGGGCGAAT TACTCAGGCG
GGTAAGCGCA GCGCGTATCC GCTTGCCCTT ACTACGGCGG CGAAAGTGTT TACTCACCGG
ACTGTCGTGG TCGGCAATGC GGCGCAGACG TTGCATCCTA TCGCCGGACA AGGGTTTAAT
CTCGGTCTGC GCGATGTCAT GAGCCTGGCG GAAACGCTGG TCGCGGCACA GGACGCGGGC
GAGGATATTG GCGCCTGGCA CGTGTTATCG CGCTATCAGC AGCGTCGTCA GGTTGACCGG
GATACGACGA TTGGCGTAAC GAACGGTCTG GTCCATGTGT TTGCAAATCG TTGGGCGCCG
CTGGTTATTG GGCGCAATAT CGGTTTAATG GCGATGGAAT TATTACCGCC TGCGCGCGAT
GCGCTGGCAC AGCGGACCTT AGGTTGGGTT GCGCGTTAA
|
|---|
| Protein sequence | MSVIIVGGGM AGATLALAIS QFSHGTLPVH LIEAKAPEAD GHPGFDARAI ALAAGTCQQL
ARIGVWQAIS DCATAINTVH VSDRGHAGFV TLDAQDYSLA ALGHVAELHD IGLRLFALLR
KAPGVTLHCP ERVASVSRTQ QQVNVTLENG NVIAGSVLVA ANGTHSALAS ACGVDWHQEP
YEQLAVIANV ATAIPHQGRA FERFTPNGPL AMLPMSHGRC SLVWCHPLDQ RDEVLSWSDA
QFCHALQAAF GWRLGRITQA GKRSAYPLAL TTAAKVFTHR TVVVGNAAQT LHPIAGQGFN
LGLRDVMSLA ETLVAAQDAG EDIGAWHVLS RYQQRRQVDR DTTIGVTNGL VHVFANRWAP
LVIGRNIGLM AMELLPPARD ALAQRTLGWV AR
|
|---|
| |