Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2962 |
Symbol | hypF |
ID | 6795000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2896253 |
End bp | 2898493 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642777130 |
Product | [NiFe] hydrogenase maturation protein HypF |
Protein accession | YP_002147739 |
Protein GI | 197249232 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC GATTACACGG CGACGTGTGT AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGATC CGTCGCAATT TATTGCCGCG CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGGTA TGGGAGCGCG CACCGACGGA TTTCACCATT CGTCAGAGCG CAGGCGGTTC GATGAACACG CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCAGGC GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GCGGACCACG CTTCACCATT ATTCGCGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG CGGCGTTTCC CTTGTGTCCG GAATGCGACA GCGAATACCG CGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCCGGAG GCATTATTGC CGTTAAAGGG CTGGGTGGTT TTCATCTGGC CTGCGACGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG GCGCGTAAAC ATCGCCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG CCGACCGCGG CGCGTTCACT GCTGACCACG CCAGCGGCCC CGATTGTACT GGTGGATAAG CAGTATGTAC CTTCGCTGAG TGAGGGCATC GCGCCAGGAC TTACGGAGGT GGGCGTGATG CTGCCAGCCA ACCCATTGCA ACATCTCTTG TTGCAGGCGC TCAATTACCC GCTGGTGATG ACATCCGGCA ACCTGAGCGG CAAACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT TTACACGATA TTGCCGATGG TTTTCTGTTG CACAATCGCG ACATTGTACA GCGCATGGAC GACTCTGTTG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCGG TTGTCAGCCA GCATTTAGGC GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTCT GATCCAGTCA ATCTACGATT TTACCCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT CAGTGGGCCA GTGAGATGCG TCTGCCGACA GAGACGGTGT TACACCATCA TGCCCATGCG GCGGCTTGCC TGGCCGAGCA TGGTTGGCCG CTGGACGGCG GAGAGGTGAT TGCCCTGACG GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC AATTATCGCG AGTGCGAACA TTTAGGTGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT CTGGCTGCCA AACATCCGTG GCGTAATCTG TTGGCGCAGT GCCTGCGCTT TGTGCCGGAC TGGCAGGATT ATCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAATGT CCTGGCGCGT GCCATTGAGC GCGGCGTCAA TGCCCCGTTG GCCTCTTCCT GCGGGAGGTT GTTCGACGCG GTGGCTGCCG CGCTTCGCTG CACGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGGCAAT GGTTGAACTG GCAGGCCACG CCCGTGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTGATACAC AACCGCTTAC TGCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG CAGCGGTTAC CAGCGGGCGA CGGCGGACTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG CGAGCGTTAA GGGAAGTGTA G
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Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLRLHGDVC NDGDGVVVRL LEDPSQFIAA LYQDCPPLAR IDSVEHASLV WERAPTDFTI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ECDSEYRDPY DRRFHAQPVA CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR ARKHRPAKPL AVMLPTAQTL PTAARSLLTT PAAPIVLVDK QYVPSLSEGI APGLTEVGVM LPANPLQHLL LQALNYPLVM TSGNLSGKPP AITNEQALDD LHDIADGFLL HNRDIVQRMD DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD LAAKHPWRNL LAQCLRFVPD WQDYPETAGL QQQNWNVLAR AIERGVNAPL ASSCGRLFDA VAAALRCTPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT PVQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP QRLPAGDGGL SFGQGVIAAA RALREV
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