Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2749 |
Symbol | rseA |
ID | 6794740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2692008 |
End bp | 2692658 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642776927 |
Product | anti-RNA polymerase sigma factor SigE |
Protein accession | YP_002147544 |
Protein GI | 197251640 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.441788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAG AAAAACTTTC CGCTTTGATG GATGGCGAAA CGTTGGATAG TGAGCTGCTC AAAGCGCTTA CGCACGACCC GGAAATGCAG AAAACCTGGG AGAGTTATCA CCTGATCCGC GATTCAATGC GGGGGGATAC GCCTGACGTT CTCCATTTCG ATATATCCGC TCGCGTGATG GCCGCTATTG AAAACGAGCC AGTACGTCAG GTGTCGCCAT TAATCCCTGA GGCCCAACCC GCTCCGCAGC AATGGCAGAA AATGCCGTTC TGGAAAAAAG TGCGTCCGTG GGCGGCGCAG CTTACCCAAA TGGGCGTGGC GGCGTGCGTT TCACTTGCAG TTATCGTCGG TGTCCAGCAC TATAATGGGC AATCTGAAAC ATCCCAACAA CCTGAAACGC CGGTTTTCAA TACCCTGCCT ATGATGGGGA AAGCCAGCCC GGTAAGTCTG GGAGTGCCTT CTGAAGCAGC GCCTGTCGGC AGTCAGCAAC AGCAGGTACA GGAGCAGCGT CGTCGCATTA ATGCCATGTT GCAGGACTAT GAACTGCAGC GCCGACTGCA CTCCGAACAG CTTCAGTTTG AGCAGGCGCA AACCCAGCAA GCCGCGGTAC AGGTGCCAGG AATCCAAACT TTAGGAACGC AATCGCAGTA A
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Protein sequence | MQKEKLSALM DGETLDSELL KALTHDPEMQ KTWESYHLIR DSMRGDTPDV LHFDISARVM AAIENEPVRQ VSPLIPEAQP APQQWQKMPF WKKVRPWAAQ LTQMGVAACV SLAVIVGVQH YNGQSETSQQ PETPVFNTLP MMGKASPVSL GVPSEAAPVG SQQQQVQEQR RRINAMLQDY ELQRRLHSEQ LQFEQAQTQQ AAVQVPGIQT LGTQSQ
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