Gene SeAg_B1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1972 
Symbol 
ID6793673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1916956 
End bp1917591 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID642776198 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002146829 
Protein GI197251296 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.134426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGG ATACCACGAG TTGCGCGAAG AAAAGCCGTG GCCGACCAAA AGTGTTCGAC 
AGGGAAGCCG CGCTTGATAA GGCCATGACT CTCTTCTGGC AGCACGGCTA TGAAGCAACT 
TCGCTTGCCG ATCTCGTAGA GGCTACCGGG GCGAAAGCGC CTACTCTCTA TGCGGAATTC 
ACTAACAAAG AAGGATTATT TCGCGCTGTC CTGGATCGCT ACATCACTCG CTTTGCCTCA 
AAGCACGAAG CCCAGCTCTT TTGTGAAGAG AAAAGCGTGG AATCGGCGCT GGAAGATTAC 
TTCACAGAAA TTGCCGCCTG CTTTACCAGT ACAGACACGC CGGCTGGCTG CTTTATGATT 
AATACGTCCG CCACCCTGGC CGCCTCCTCG CGCGATATCG CCCGCACGGT AAAATCACGC 
CACGCCATGC AGGAACAGAC GCTCATCCAG TTTCTGCGCC AACGTCAGGA GCGCGGTGAA 
ATTCCGGCGT ACTGTAACCC GCAGGCGCTC GCAGAATATA TAAACTGTAT TTTACAGGGA 
ATGTCGATCA GCGCCCGTGA AGGTGCCACC TTCGAACAAC TGATGCAAAT TACGCGTACG 
ACTCTGCGCA TCTGGCCTGA ACTGCTCAAG CCCTAA
 
Protein sequence
MTTDTTSCAK KSRGRPKVFD REAALDKAMT LFWQHGYEAT SLADLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYITRFAS KHEAQLFCEE KSVESALEDY FTEIAACFTS TDTPAGCFMI 
NTSATLAASS RDIARTVKSR HAMQEQTLIQ FLRQRQERGE IPAYCNPQAL AEYINCILQG 
MSISAREGAT FEQLMQITRT TLRIWPELLK P