Gene SeAg_B1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1885 
SymbolgapA 
ID6796357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1843591 
End bp1844586 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content51% 
IMG OID642776115 
ProductgIyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_002146749 
Protein GI197249688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000106844 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTCCGTGCT 
GCTCAGAAAC GTTCTGACAT CGAGATCGTT GCAATCAACG ACCTGTTAGA CGCAGAGTAC 
ATGGCATACA TGCTGAAATA TGACTCCACT CACGGCCGTT TCGACGGTAC TGTTGAAGTG 
AAAGACGGTC ATCTGATCGT TAACGGTAAA AAAATCCGTG TTACCGCTGA ACGCGATCCG 
GCTAACCTGA AATGGGACGA AGTTGGTGTT GACGTAGTGG CTGAAGCTAC CGGTATCTTC 
CTGACTGACG AAACCGCGCG TAAACACATC ACCGCTGGCG CGAAAAAAGT GGTTCTGACG 
GGTCCGTCTA AAGACAACAC CCCAATGTTT GTTAAAGGCG CTAACTTTGA CAAATACGAA 
GGCCAGGACA TCGTTTCCAA CGCTTCCTGC ACCACCAACT GCCTGGCGCC GCTGGCTAAA 
GTTATCAACG ACAACTTCGG CATCATCGAA GGTCTGATGA CTACTGTTCA CGCGACTACC 
GCAACCCAGA AAACCGTTGA CGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCA 
TCTCAGAACA TCATCCCGTC CTCTACTGGC GCTGCTAAAG CGGTAGGTAA AGTACTGCCG 
GAACTGAATG GCAAACTGAC TGGTATGGCG TTCCGCGTTC CTACTCCGAA CGTATCCGTT 
GTTGACCTGA CCGTTCGTCT GGAAAAAGCG GCTACCTACG AGCAGATCAA AGCTGCTGTT 
AAAGCTGCTG CCGAAGGCGA AATGAAAGGC GTTCTGGGTT ACACCGAAGA CGACGTTGTA 
TCTACCGATT TCAACGGCGA AGTATGCACT TCCGTGTTCG ATGCTAAAGC AGGCATCGCG 
CTGAACGACA ACTTCGTGAA ACTGGTCTCC TGGTACGATA ACGAAACCGG TTACTCCAAC 
AAAGTACTGG ACCTGATTGC TCACATCTCC AAATAA
 
Protein sequence
MTIKVGINGF GRIGRIVFRA AQKRSDIEIV AINDLLDAEY MAYMLKYDST HGRFDGTVEV 
KDGHLIVNGK KIRVTAERDP ANLKWDEVGV DVVAEATGIF LTDETARKHI TAGAKKVVLT 
GPSKDNTPMF VKGANFDKYE GQDIVSNASC TTNCLAPLAK VINDNFGIIE GLMTTVHATT 
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVLP ELNGKLTGMA FRVPTPNVSV 
VDLTVRLEKA ATYEQIKAAV KAAAEGEMKG VLGYTEDDVV STDFNGEVCT SVFDAKAGIA 
LNDNFVKLVS WYDNETGYSN KVLDLIAHIS K