Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1734 |
Symbol | sodC |
ID | 6796631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1699414 |
End bp | 1699935 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642775969 |
Product | superoxide dismutase |
Protein accession | YP_002146605 |
Protein GI | 197248956 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0827551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGAT TAAGTTTAGC GATGGTGACG CTGTTGGCCT GTGCGGGTGC GCAGGCCAAC AGCGAGAAAG TAGAGATGAA CCTGGTGACG GCGCAAGGCG TAGGACAGTC TATCGGCACC GTCGTCATCG ATGAAACCGA AGGTGGCTTA AAATTTACCC CACACCTTAA AGCGTTGCCG CCGGGCGAGC ATGGTTTTCA CATTCATGCC AACGGTAGCT GCCAGCCCGC GATTAAAGAC GGCAAAGCGG TTGCCGCAGA AGCCGCTGGT GGTCATCTGG ACCCACAAAA TACCGGCAAG CATGAAGGAC CGGAAGGCCA GGGGCATCTG GGCGACCTCC CGGTGTTAGT CGTTAATAAT GATGGTATCG CCACCGAACC GGTTACTGCG CCGCGTCTGA AGTCTCTTGA TGAAGTGAAA GATAAAGCGC TCATGATCCA TGTGGGCGGC GATAACATGT CCGATCAGCC GAAACCGCTC GGCGGCGGCG GAATGCGTTA CGCCTGCGGC GTCATTAAAT AA
|
Protein sequence | MKRLSLAMVT LLACAGAQAN SEKVEMNLVT AQGVGQSIGT VVIDETEGGL KFTPHLKALP PGEHGFHIHA NGSCQPAIKD GKAVAAEAAG GHLDPQNTGK HEGPEGQGHL GDLPVLVVNN DGIATEPVTA PRLKSLDEVK DKALMIHVGG DNMSDQPKPL GGGGMRYACG VIK
|
| |