Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1462 |
Symbol | pspC |
ID | 6796245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1421670 |
End bp | 1422029 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642775705 |
Product | DNA-binding transcriptional activator PspC |
Protein accession | YP_002146341 |
Protein GI | 197250991 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.269828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGGAA TCAATCTGAA TAAAAAACTA TGGCGTATGC CGCAAAAGGG CATGGTGCGT GGCGTTTGCG CCGGGATCGC CGACTACCTT GATGTACCGG TAAAACTGGT GCGTATTCTG GTCGTGCTGT CGATTTTCTT TGGGCTGGCG TTTTTTACCG TAGTGGCCTA TATCGTCCTG TCTTTTGTAC TGGACCCTAT GCCGGATAAT CTGGCCGCAG GCAAACCGCA GCCGACCAGC GGCGAACTGC TGGATACCGT AGACAGAGAG CTTGCCGCAG GCGAAAAGCG TTTGCGAGAA ATGGAACGCT ACGTCACGTC AGATACGTTC ACACTGCGTA GTCGTTTCCG TCAACTTTAA
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Protein sequence | MGGINLNKKL WRMPQKGMVR GVCAGIADYL DVPVKLVRIL VVLSIFFGLA FFTVVAYIVL SFVLDPMPDN LAAGKPQPTS GELLDTVDRE LAAGEKRLRE MERYVTSDTF TLRSRFRQL
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