| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1375 |
|---|
| Symbol | |
|---|
| ID | 6796031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 1338883 |
|---|
| End bp | 1340280 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642775627 |
|---|
| Product | nitrite extrusion protein 1 |
|---|
| Protein accession | YP_002146265 |
|---|
| Protein GI | 197249092 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0207934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACT CATCCGTCCC TGAAAGGGCA ACTGGCGCTG TTATCACGGA ATGGCGTCCG
GAAGATCCGG CATTCTGGCA GCAGTGCGGC CATCGTGTCG CCAGCCGTAA TTTGTGGATT
TCTGTCCCGT GTTTACTGCT GGCGTTTTGC GTCTGGATGC TATTCAGCGC AGTGGCGGTG
AACCTGCCGA AAGTGGGATT TAATTTTACG ACCGATCAGC TCTTTATGTT GACTGCGCTG
CCATCTGTTT CCGGCGCGCT GCTACGGGTG CCTTACTCCT TTATGGTGCC GCTATTTGGC
GGACGTCGCT GGACAGCGTT CAGTACCGGT ATCCTCATCG TGCCTTGCGT ATGGTTAGGC
TTTGCCGTTC AGGATACCAG TACGCCATTT AGCACTTTCA TTATTATTTC CTTGCTGTGT
GGTTTTGCCG GCGCGAACTT TGCCTCCAGT ATGGCGAACA TCAGCTTTTT CTTTCCTAAA
CAAAAGCAGG GCGGCGCGCT GGGTCTGAAC GGTGGTCTGG GCAATATGGG CGTGAGCGTG
ATGCAGCTGG TTGCGCCGCT GGTGGTTTCG CTCTCTATCT TTGCCGCCTT TGGCAGCCAC
GGTGTAGAGC AGCCGGACGG TTCTCAGCTC TATCTGGCGA ACGCAGCCTG GATTTGGGTG
CCTTTCCTGG CCATTTTTAC GCTGGCGGCG TGGTTCGGCA TGAACGAACT GGCGACCTCT
AAGGCCTCGC TAAAAGAGCA ACTGCCGGTG CTCAAACGTG GTCATCTGTG GATCATGAGT
CTGCTGTATC TGGCGACCTT CGGATCGTTT ATCGGTTTCT CCGCGGGGTT CGCTATGCTG
TCTAAAACGC AATTCCCGGA TGTGCAGATC CTGCATTATG CGTTTTTCGG TCCGTTTATC
GGCGCGCTGG CGCGTTCGGC AGGCGGCGCA ATTTCTGACC GTCTGGGGGG GACTCGCGTC
ACGCTTATCA ACTTTGTCCT GATGGCGATT TTCAGCGGTC TGCTGTTCCT GACATTACCT
ACTGGCGGCG TTGGCGGTAG CTTTATCGCG TTCTACGGGG TATTTCTGGC GCTGTTCCTG
ACGGCTGGGT TGGGGAGTGG TTCTACCTTC CAGATGATCT CCGTTATCTT CCGTAAACTG
ACGATGGACC GGGTAAAAGC GGAAGGCGGG TCGGACGAAA GAGCCATGCG TGAAGCGGCG
ACCGATACGG CGGCGGCGCT GGGCTTTATT TCCGCGATTG GCGCGATTGG CGGCTTTTTT
ATTCCGAAAG CGTTTGGTTC ATCTTTAGCA TTAACCGGTT CTCCAGTCGG CGCGATGAAG
GTCTTTCTTA TTTTCTATAT CGCCTGCGTC GTTATTACCT GGGCGGTATA TGGACGTCAT
TCTAAAAATA AAAAGTAA
|
|---|
| Protein sequence | MSHSSVPERA TGAVITEWRP EDPAFWQQCG HRVASRNLWI SVPCLLLAFC VWMLFSAVAV
NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPLFG GRRWTAFSTG ILIVPCVWLG
FAVQDTSTPF STFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV
MQLVAPLVVS LSIFAAFGSH GVEQPDGSQL YLANAAWIWV PFLAIFTLAA WFGMNELATS
KASLKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LHYAFFGPFI
GALARSAGGA ISDRLGGTRV TLINFVLMAI FSGLLFLTLP TGGVGGSFIA FYGVFLALFL
TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SDERAMREAA TDTAAALGFI SAIGAIGGFF
IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH SKNKK
|
|---|
| |